KEGG   Sphingobium sp. JS3065: NUH86_23780
Entry
NUH86_23780       CDS       T10812                                 
Name
(GenBank) type IV secretory system conjugative DNA transfer family protein
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
spjs  Sphingobium sp. JS3065
Pathway
spjs03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:spjs00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NUH86_23780
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:spjs02044]
    NUH86_23780
Enzymes [BR:spjs01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     NUH86_23780
Secretion system [BR:spjs02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   NUH86_23780
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind DEAD
Other DBs
NCBI-ProteinID: UZW58128
LinkDB
Position
pNIN2:complement(45862..47778)
AA seq 638 aa
MIQKTGSNRLALALVLLPITLLLIGLLTGTVAWFFLKMPAAAYDPLRLPGFFWYYRHDPV
VTEALWRGAVIGVPLPVLLMAIVLRPKRNLHGEARFAREGEIRKAGLRAKKGIVLGRVRN
GFFRNGFLMVGKMEHVLLEAPTGSGKGVGIVIPNLLQWPDSVVVLDIKRENYEITAGFRR
KGGQKVVLFNPTDREGRTARYNPLSYINRADPIEVLVELQKIATMLFVPPEKGEAFWTES
ARTAFVGIASWIAAKPERPFSFGEIYRTITMPGMKAFFAKEAGDSALSEGCRAALSDFTS
SADNTFTGIIQTVTSKLNLWINPIVDRATAESDFSLTDLRRIPTSIYLGVSPDELDRVAP
LYNLFFQQLIDLNTRQLPDDGEKLSVLLILDEFARLGRAQVIANAFSYVRGYGLRLLPVI
QSRSQLRNVYGEHGADEIVSNCGVEIAFTPKELRVAKELSERLGYLGQDAESRSLTIHGL
LANRSKTVSEQRRALMLPQELMQLPEEDILVIRGGIPVIRGKKIRYFKDAVFRSRLTPAP
EVAALPKPIAPIAPVDDLSDEELAAFNDYSALADDQVQDIPEDVLALDRDMPNLTVKDGS
MAFDEIDFDDIIGPDPTKEEWEGQRRDLVLSEGEEYGR
NT seq 1917 nt   +upstreamnt  +downstreamnt
ttgatccagaaaacaggctctaacaggctcgcactggccctcgtcctccttccgatcaca
ctgctgctgatcggcctgctgaccggcacggtggcgtggttctttctcaaaatgcccgcc
gcggcttatgatccgctcaggctccccggcttcttctggtattaccgccatgatcctgtc
gtgaccgaagcgctctggcgaggcgcggtcataggcgtgccgctgccggtgttgcttatg
gctatcgtcctgcggccgaaaaggaaccttcacggcgaagcccgcttcgcgcgcgaaggc
gaaatccgcaaggcgggccttcgcgctaagaagggcattgtgctcggccgcgtccgcaat
ggctttttccgcaacggctttctcatggtgggcaagatggagcatgtattgctcgaagcg
cctaccggatcgggcaagggcgttggcatcgtcatcccgaatctgttgcaatggccggat
tcggttgtcgtgctcgatattaagcgcgagaactatgaaatcacggcgggttttcgccgc
aagggcggccaaaaggttgtgctgttcaaccctacggacagggaaggccgcacggcccgc
tacaacccgcttagctatatcaacagggccgatccaatagaggtcctggtcgaattgcag
aagattgccacgatgctcttcgtgcccccggagaagggcgaggcattctggacggaatca
gcccgcacggcctttgtcggcattgcatcgtggatcgcggccaagcctgaacgaccgttc
tcttttggcgagatataccggactatcacgatgccggggatgaaggcattcttcgccaag
gaagccggcgatagcgcgctatcggaagggtgccgcgccgcattgagcgattttacgtcc
agcgcggacaacacattcaccggcattatccagaccgtcacctccaagctcaatctctgg
atcaatccaattgtcgatcgcgcgacggccgaaagcgacttttccctgacagaccttcgc
cgcataccgacctcgatctatctcggcgtctcaccggatgaactcgatagggtcgcgccg
ctctacaatctgtttttccaacagctgatcgatctcaacacgcggcaactgcccgacgat
ggcgaaaagctgtccgtgctgctcattctggacgaatttgctcggctcggccgcgcccag
gtcattgcaaatgcgttctcctatgtgcgcggctatgggctccgtctgcttcccgtcatc
cagtcccgctcccagctgcggaatgtctatggggagcatggcgcggacgaaatcgtatca
aattgcggggtcgaaattgcgtttacgccgaaggagctgcgggtcgcaaaggaactgtcg
gaacgcctcggctatctcggtcaggatgcggaaagccggtccctgacgatacatggattg
ctcgccaatcgaagcaagacagtctccgaacagcgtcgcgcgctgatgctcccgcaagag
ctgatgcagctgcccgaagaagatattctcgtcatccggggcggtatccctgtcattcgc
ggcaagaaaatccgctacttcaaggatgccgtgttccgctcgcgcttgacgcctgcgccg
gaagtagcggcgctgcccaagccaatcgcgccgatcgcgcccgtcgatgatttgagcgat
gaagagctggcggctttcaacgactattccgcgctggccgatgaccaggtgcaggacatt
cccgaagacgttctcgccctcgatcgcgacatgccgaaccttacagtgaaggacggcagc
atggcattcgatgaaatcgacttcgacgacattattggtcccgacccgacgaaagaggag
tgggaaggtcagcgccgggatctagttctgagtgagggagaagaatatggccgatga

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