Shewanella pealeana: Spea_2348
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Entry
Spea_2348 CDS
T00606
Name
(GenBank) Radical SAM domain protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
spl
Shewanella pealeana
Pathway
spl00790
Folate biosynthesis
spl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
Spea_2348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spl03016
]
Spea_2348
Enzymes [BR:
spl01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
Spea_2348
Transfer RNA biogenesis [BR:
spl03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Spea_2348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Peptidase_C15
DUF1842
Motif
Other DBs
NCBI-ProteinID:
ABV87668
UniProt:
A8H531
LinkDB
All DBs
Position
complement(2861089..2861757)
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AA seq
222 aa
AA seq
DB search
MKYPVNEVFETIQGEGTHTGVPAIFVRLQGCPVGCSWCDTKQTWELLEDNRVAPDLVIQV
DGTVGRWSELTVEQLVSAFEDKGFTAKLVVITGGEPCLYDLSELTQYLHAQGYQTQIETS
GTFDVLCHPDTWVTVSPKVNMKGGYAVLAQALNRANEIKHPVATQKHIDELDLLLEDINL
TGKTVCLQPISQIPRATELAMKTCIERNWRLSVQTHKYLNID
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatccagttaatgaagtgtttgaaacaatacaaggcgaggggactcatactgga
gtgccagccatttttgttagacttcaaggctgtcctgttggttgctcttggtgcgacact
aagcagacttgggaattgctcgaggataatcgagttgcaccggacttagttattcaagtc
gatggaactgtgggtcgttggtcggagttaactgtagagcagttagtcagtgcgtttgaa
gacaagggctttaccgccaagcttgttgtgatcacaggcggtgaaccttgcttatatgac
ttgagcgaattaactcaatatctccatgcccaaggttatcaaacgcagattgagaccagt
ggaaccttcgatgtgctttgtcatccagatacttgggtaacggtatcaccaaaagtgaac
atgaaaggcggatatgctgtattagctcaggcacttaatcgtgctaatgagattaagcat
ccagtagcgacgcaaaagcacatcgatgagttagatctcctgcttgaagacattaactta
accggtaaaaccgtctgtttacaacccattagccagatacctcgtgcgacagagttggcg
atgaagacctgtattgagcgtaactggcgtttatcggttcaaactcataagtacttaaat
attgactag
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