Sulfuriferula plumbiphila: SFPGR_14780
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Entry
SFPGR_14780 CDS
T06621
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
splb
Sulfuriferula plumbiphila
Pathway
splb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
splb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SFPGR_14780 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
splb03400
]
SFPGR_14780 (nth)
Enzymes [BR:
splb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SFPGR_14780 (nth)
DNA repair and recombination proteins [BR:
splb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SFPGR_14780 (nth)
Prokaryotic type
SFPGR_14780 (nth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
YscO
Ogg-HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BBP04056
LinkDB
All DBs
Position
complement(1420526..1421161)
Genome browser
AA seq
211 aa
AA seq
DB search
MNAAKRREIFARFATANPHPATELEYTTPFELLVAVVLSAQATDKSVNLATRALFPHANT
PAALLALGQAGLEKYVQRIGLYKSKARHLIKTCQILLARHNGEVPATRAALEALPGVGRK
TANVILNTAFGEAVMAVDTHIFRVANRIPLAPGKTVLEVEHRLMKNIPREYLQDAHHWLI
LHGRYTCKARKPDCPHCLIADLCEYPQKTAG
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcagccaaacgccgcgaaatttttgcacgcttcgcgacggccaacccccacccc
gccaccgagctggaatacaccaccccgttcgaactgctggtggcagtggtgctgtcggcg
caagccaccgacaagagcgtcaacctcgccacgcgcgcactcttcccgcacgccaacacc
cccgctgcgctgcttgcgctgggccaggccgggctggaaaaatacgtgcagcgcatcggc
ttgtacaagagcaaggccagacacctgatcaaaacctgccagattctgcttgcccggcac
aacggtgaagtgcccgccacccgtgcagcgctcgaagccctgcccggcgtggggcgcaag
accgccaacgtgatactcaataccgcgtttggcgaagcggtcatggcagtggatacgcat
attttccgcgtggccaaccggattccgctggcccccggcaaaaccgtgctcgaggtggag
cacagattgatgaaaaacattccgcgcgaatacctgcaggacgcccaccactggctgatt
ttgcatggccgttatacctgcaaggcacgcaaacccgattgcccgcattgcctgattgcc
gacctgtgcgaatatccgcagaaaacggcgggctga
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