Sphingomonas sp. LK11: AV944_07855
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Entry
AV944_07855 CDS
T04954
Name
(GenBank) efflux transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
splk
Sphingomonas sp. LK11
Pathway
splk01501
beta-Lactam resistance
splk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AV944_07855
01503 Cationic antimicrobial peptide (CAMP) resistance
AV944_07855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
splk03036
]
AV944_07855
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
splk02000
]
AV944_07855
01504 Antimicrobial resistance genes [BR:
splk01504
]
AV944_07855
Chromosome and associated proteins [BR:
splk03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
AV944_07855
Transporters [BR:
splk02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
AV944_07855
Antimicrobial resistance genes [BR:
splk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AV944_07855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
RND-MFP_C
HH_MFP_RND
YknX_C
HH_EMRA
BSH_CusB
Beta-barrel_RND_2
HH_YBHG
CzcB_C
BSH_CzcB
Motif
Other DBs
NCBI-ProteinID:
APX65767
LinkDB
All DBs
Position
1648984..1650162
Genome browser
AA seq
392 aa
AA seq
DB search
MGRVLASAALLALAACGAGGKQQQQQAAQGPAPVSYVVASEQPVTLTTELPGRTTAFETS
DVRPQVNGLITQRLFVEGDMVRQGQPLYHIDPAPYQAQVASARAALTRAQASIASSAALA
RRYGELVKINAIARQEYENAQTSAAQARADVAAQQAALRSAQIDLARTTIRAPITGRIGR
SVFTTGALVSASQADALATIQRIDPIYVDIQEPSAELLKLRRQIMSGQLTRDGNARVRLK
LEDGSDYGPQGTLRFADVTVDPTTGSQVIRALFPNPNGLLLPGMFARASLVEGTQSNAFL
VPQRAVSRDEKGQATVMVIGAGNKVEGRTLQTGRSVGDNWLVTSGLKAGDKIIVEGGMML
RPGMPVQGKPWNPNAKPAAAQPQQGSAQTQAK
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtgtgttggcatctgccgccttgctcgcactggccgcttgcggtgccggtggc
aagcaacagcagcagcaggcggcgcagggaccggcgccggtcagttatgtggtggcgagc
gagcagcctgtcaccctcacgaccgaattgcccggcaggaccaccgcattcgaaacctcc
gatgttcggccccaggtcaacggcctgatcacccagcggctcttcgtcgagggtgacatg
gtccgccagggccagccgctatatcatatcgatccggcaccctaccaagctcaggtcgcc
agtgcccgcgccgcgctgacccgtgcgcaggcgagcatcgcgtcgagcgccgcgctggcg
cgccgctatggcgaactggtcaagatcaacgcgatcgcccgccaggagtatgagaacgcc
cagaccagcgccgcccaagcgcgtgccgacgtcgcggcgcagcaggcagccctccgctcg
gcgcagatcgatctggctcgcaccaccatccgtgcgccgatcaccggccggatcggccgt
tcggtgttcaccaccggtgcgctggtgtccgcgtcgcaggccgacgcgctggccaccatt
cagcgcatcgaccccatttatgtcgatatccaagagccgagcgccgaactgctgaagctg
cggcgccagatcatgagcggccagctgacccgcgacggcaatgcccgggtccggctgaag
ctggaggacggcagcgactatggtccgcagggtacgctccgcttcgccgacgtcaccgtc
gacccgaccaccggatcgcaggtgatccgcgcattgttccccaatcccaatgggctgctg
ctgcccggcatgttcgcccgcgcctcgctggtcgagggaacgcagtccaatgccttcctg
gtgccccagcgtgcggtcagccgcgacgaaaagggccaggcgaccgtgatggtgatcggt
gcgggcaacaaggtcgaggggcgcacgctccagaccgggcggtcggtcggcgacaactgg
ctggtcaccagcgggttgaaggccggggacaagatcatcgtcgaaggcggcatgatgctg
cgcccgggtatgccggtgcagggcaagccgtggaatcccaacgccaagcccgcggccgcg
cagccgcaacagggctcggcgcagacacaggcgaagtaa
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