Sphingomonas sp. LK11: AV944_14460
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Entry
AV944_14460 CDS
T04954
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
splk
Sphingomonas sp. LK11
Pathway
splk00300
Lysine biosynthesis
splk00550
Peptidoglycan biosynthesis
splk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AV944_14460
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AV944_14460
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
splk01011
]
AV944_14460
Enzymes [BR:
splk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AV944_14460
Peptidoglycan biosynthesis and degradation proteins [BR:
splk01011
]
Precursor biosynthesis
Amino acid ligase
AV944_14460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
APX67728
LinkDB
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Position
complement(3148338..3149780)
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AA seq
480 aa
AA seq
DB search
MKLNQLTADMQGDIQGEGGDALVSGFAIDHRKVAPGTIFGAFQGARVNGEDYIADAVRSG
AVAVVARPGVTVEGAVHIASDEPRAAFARLAAAFFAPFPATAVAVTGTNGKTSTVEMTRQ
LWRMAGHHAASIGTLGVTTADERTYTGLTTPDVVTFLSNVAGLAREGVTHLAFEASSHGL
TQYRTEGLKVSAAAFTNLSRDHLDYHGDMGAYLAAKMRLFSEVLSLDGTAVVWADDVESG
RVIDLARARGNKLVTVGTRGSTLKLVERHPTLLGQGLVIEDEHGQAHKVQLPLIGAYQAA
NALVAAGLVLATGGDLTTTIANLSRLQPVRGRLERAAIARSGAPVYVDYAHTPDAIEAAI
AALKPHAGGRLIVVIGAGGDRDPGKREVMGQVASMHADRVIVTDDNPRTEDPAAIRAQVM
RGATGAIEIGDRREAIAAAIAEAGEQDIVLIAGKGHEQGQIVGDLVLPFDDVTVARECAA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaaccaactgaccgcagacatgcagggcgatattcagggcgagggcggcgac
gccctcgtctccggtttcgcgatcgatcaccgcaaggtcgcgcccggtaccatcttcggc
gcgttccagggcgcacgggtgaatggcgaggactatatcgccgacgcggtgcgcagcggt
gcggtggcggtcgtcgcgcggcccggcgtgacggtcgagggagcggtccatatcgcctcc
gacgaaccgcgcgcggcctttgcgcggctggcggcggcgttcttcgcgccgttcccggcg
acggcggtggcggtgaccggcaccaacggcaagacctcgacggtcgagatgacgcgccag
ctctggcgcatggcggggcatcacgccgcctcgatcgggacgctgggcgtcaccaccgcc
gacgagcggacctataccgggctgaccacgccggacgtcgtgaccttcctgtccaacgtc
gccgggctcgcgcgcgagggcgtgacccatttggcgttcgaggcgtcgagccacggcctg
acccagtatcggaccgaggggctgaaggtatcggcggcggccttcaccaacctgtcgcgc
gatcacctcgactatcatggcgacatgggcgcctatctcgcggcgaagatgcggcttttt
tccgaagtcctgtcgctcgacggcacggcggtcgtgtgggccgacgatgtcgagagcggg
cgggtgatcgatctggcccgcgcgcgcggtaacaagctggtgacggtcggtacgcgcgga
tcgacgctgaaactggtcgagcggcatccgaccctgttgggccaggggctggtgatcgag
gacgagcatgggcaggcgcacaaggtgcaactgccgctgatcggcgcctatcaggccgcc
aatgcgctggtcgcggcggggctggtgctggcgaccggcggcgatctgacgacgaccatc
gccaacctctcccggttgcagccggtacgcgggcggctggagcgcgccgccatcgcgcgg
agcggggcgccggtctatgtcgactatgcccatacccccgacgcgatcgaggcggcgatc
gccgcgctcaaaccccatgcgggcgggcggctgatcgtcgtgatcggcgcgggcggcgac
cgcgatccgggcaagcgggaggtcatggggcaggtcgcctcgatgcatgccgaccgggtg
atcgtgaccgacgacaatccccgcaccgaagaccccgccgcgatccgcgctcaggtgatg
cgcggtgcgaccggtgcgatcgagatcggcgaccgtcgcgaggccattgccgccgccatc
gccgaggcgggcgagcaggatatcgtgctgatcgcgggcaaggggcatgagcagggccag
atcgtcggcgatctcgtcctgccgttcgacgatgtcaccgtcgcgcgggagtgtgcggca
tga
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