Sphingomonas sp. LM7: BXU08_17225 Help Entry BXU08_17225       CDS       T04824                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism splm  Sphingomonas sp. LM7 Pathway splm03030   DNA replication splm03410   Base excision repair splm03420   Nucleotide excision repair splm03430   Mismatch repair Brite KEGG Orthology (KO) [BR:splm00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     BXU08_17225    03410 Base excision repair     BXU08_17225    03420 Nucleotide excision repair     BXU08_17225    03430 Mismatch repair     BXU08_17225  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:splm03032]     BXU08_17225    03400 DNA repair and recombination proteins [BR:splm03400]     BXU08_17225 Enzymes [BR:splm01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      BXU08_17225 DNA replication proteins [BR:splm03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      BXU08_17225 DNA repair and recombination proteins [BR:splm03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      BXU08_17225    NER (nucleotide excision repair)     GGR (global genome repair) factors      BXU08_17225    MMR (mismatch excision repair)     DNA ligase      BXU08_17225   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       BXU08_17225 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB BRCT DNA_ligase_ZBD HHH_2 PTCB-BRCT Nlig-Ia DZR_2 Motif Other DBs NCBI-ProteinID:  AQR75169 UniProt:  A0A1S6FNL6 LinkDB All DBs Position complement(3661312..3663444) Genome browser AA seq 710 aa AA seqDB search MTAPLPQTPEDAAAELETLAGQIAHHNSRYHAEDAPEISDADFDALMRRNTAIEAAFPDL VRGDSPSKSVGAVSSGRLAKAAHAQRMFSLDNGFSDEDVADFLGRVRRFLALPESEPVTL TAEPKIDGLSCSLRYVEGRLVQALTRGDGLVGEDVTANVRTIGDIPQAIAGAPAVFEVRG EVYMAKDDFAALNARLLAEAEGTGKDARQFANPRNAAAGSLRQKDAAVTASRPLRFLAWG WGEATALPGETQVEVIRAIEAMGFPVSELFVGPADLDAALAQYKKIEAQRADLGFDIDGV VYKIDRLDWQARLGFVGRAPRWGLAHKFPAERAQTTLERIDIQVGRTGKLTPVARLEPVT VGGVVVTNATLHNADEIARLGVRPGDRVILQRAGDVIPQIVENLTRDEVRDAYAFPTRCP ICDSEAVAEEGEVDVRCTGGLICPAQRLERLKHFVSRGALDIEGLGEKTLAELLDLGWIA EPADIFRLATYREELVGREGWQEKSVDALLAAIKAKRAPDAARLLFGLGIRHTGAITARD LLKRYTTLGAVQALADQIIALRDATPAVIGESETKHRARLDKAIAEHIGVENVGGAVGHA LADFFHEPHNRDAWNDLLAEVSPPPYIVETRASEVTGMTLVFTGSLETLSRDEAKAQAES LGARVAGSVSAKTDMVIAGPGAGSKLKKAAELGIRVISEEEWCTLVAAVK NT seq 2133 nt NT seq  +upstreamnt  +downstreamnt atgaccgcgccgctgccccagactccggaagatgccgccgccgagctcgaaacgctcgca ggccagattgcgcaccacaacagccgctatcacgccgaggacgcgcccgagatcagcgac gccgatttcgacgcgctgatgcggcgcaacaccgcgatcgaggcggcgtttcccgatctg gtgcgcggtgactcgccgtcgaagagcgtcggcgcggtgtcgagcggaaggctcgccaag gccgcgcatgcgcagcggatgttcagcctcgacaatggcttttcggacgaggatgtcgcc gatttcctcgggcgggtgcggcggttcctcgcactgcccgaaagcgagccggtgacgctg accgccgaacccaagatcgacgggctgtcgtgctcgttgcgctatgtcgagggcaggctg gtgcaggcgctgacgcgcggcgacgggctggtcggcgaggacgtcaccgccaatgtgcgc acgatcggcgatatcccgcaggcgatcgccggggcgcccgcggtgttcgaggtgcgcggc gaagtctatatggcgaaggacgacttcgccgcactcaacgcgcggctgctcgccgaggca gaggggacgggcaaggacgcgcgccagttcgccaacccgcgcaacgccgcggcaggatcg ctgcgccagaaggacgccgcggtcaccgcgtcgcggccgctgcgctttctcgcctggggc tggggcgaagcgactgcgctgcccggcgagacccaggtcgaagtgatccgagcgatcgag gcgatgggatttccggtctcggagctgttcgtcgggccagccgatctcgacgcggcattg gcgcagtacaagaagatcgaggcgcagcgcgccgaccttgggttcgacatcgacggcgtg gtctacaagatcgaccggctcgactggcaggcgcggctgggctttgtcgggcgggcgccg cgctgggggctggcgcataaattccctgccgagcgcgcgcagaccacgctggagcggatc gacatccaggtcggccgcaccggcaagctgacgcccgtcgcgcggctcgagccggtgacg gtgggcggagtcgtcgtcaccaatgcgacgctgcacaatgccgacgagatcgcgcggctc ggcgtccgccccggcgaccgggtgatcctccagcgtgccggcgacgtgatcccgcagatc gtcgagaacctgacgcgcgacgaagtgcgcgatgcctatgcctttcccacccgatgcccg atctgcgattccgaagcggtggccgaggaaggcgaagtcgatgtccgctgcacgggcggg ctgatctgcccggcgcagcggctggagcgattgaagcatttcgtcagccgcggcgcgctc gacatcgaggggctgggcgagaagacgctcgccgagctgctcgaccttggctggatcgcc gagcccgcggacatcttccgcctggcgacgtaccgcgaggaactcgtcgggcgcgagggc tggcaggaaaagtcggtcgacgcgctgctcgccgcgatcaaagccaagcgcgcgcccgac gccgcgcggctgctgttcgggctcggcatccgccacaccggcgcgatcaccgcgcgcgac ctgctcaagcgctatacgacgctcggcgctgtccaggcactcgcggatcagatcatcgcg ctgcgcgacgccacgcccgcggtgatcggcgaaagcgagaccaagcaccgcgcaaggctc gacaaggcaatcgccgagcatatcggcgtcgagaatgtcggcggcgcagtcggccacgcg ctggccgactttttccacgagccgcacaatcgcgatgcctggaacgacttgctcgccgag gtttcgccccccccttacatcgtcgagacacgggcttcggaagtcaccggcatgacgctg gtgttcaccggcagcctggagacgctgagtcgcgacgaggccaaggcgcaggccgaatcg ctgggcgctcgagtcgccggatcggtgtctgcgaagaccgatatggtaatcgccgggccg ggcgccgggtcgaagctcaaaaaggcagctgagctgggtatccgtgtgatttcagaggaa gaatggtgcactctggtcgctgcggttaagtga

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