Serratia inhibens: Q5A_017990
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Entry
Q5A_017990 CDS
T04576
Symbol
ypdA
Name
(GenBank) Sensor histidine kinase YpdA
KO
K27884
two-component system, LytTR family, high-concentration pyruvate sensor kinase [EC:
2.7.13.3
]
Organism
sply
Serratia inhibens
Pathway
sply02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sply00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Q5A_017990 (ypdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sply01001
]
Q5A_017990 (ypdA)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sply02022
]
Q5A_017990 (ypdA)
Enzymes [BR:
sply01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Q5A_017990 (ypdA)
Protein kinases [BR:
sply01001
]
Histidine kinases
LytTR family [OT]
Q5A_017990 (ypdA)
Two-component system [BR:
sply02022
]
LytTR family
PyrS-PyrR (pyruvate reutilization)
Q5A_017990 (ypdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
5TM-5TMR_LYT
His_kinase
HATPase_c
ECF-ribofla_trS
ECF_trnsprt
GAF_2
GAF
DUF3792
GldM_3rd
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
ANS44037
LinkDB
All DBs
Position
3806952..3808661
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AA seq
569 aa
AA seq
DB search
MHPFFEMLLAVFDRAALMLICLFFLTRTRLFRQLLQKEDHTPLELGMVTAIFSLFALFST
YSGINVEGSLVNVRVIAIMAGGILFGPWVGIITGIIAGAHRYLIDIDGITSVPCLITSII
AGICAGYINLKVKKEQRWRAGILGGMLCETLTMLLIVLWAKPTALGLDIVSKIALPMILG
TVCIGLIVLLVQSVEDEKEVIAARQAKLALDIARKTLPYFRNINSETLATICDIIRQDIK
ADAVAITDTHRVMAYVGVGEEAYPIGREGLSRVTRESIRHGKIIIKNNLENPATPQIHSQ
LVIPLWEKGEVSGALKIYYCHAHQITNTLKVMAVGLSQIISTQMEVSRIEHLRQMADKAE
MRALQSKINPHFLFNALNAISSSIRINPDTARQLIINLSRYLRYNLELNDELIDIRKELH
QIQDYIAIEQARFGAKLTVIYDIDDDISVRIPSLLIQPLVENAIVHGIQPCKGKGVVVIA
VKDQGARVKISVKDTGNGINQEVIDRVARNEMPGHNIGLLNVHHRVSLLYGEGLRIRRLE
PGTEIAFYISKNGGKLQMESSVLPAGEPS
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
gtgcaccctttttttgaaatgctgttagcggtgtttgatcgcgccgcactgatgttaatc
tgcctgtttttcctcacccgtacccggttgttccgccaactgctgcaaaaagaggaccac
acgccgctcgagctgggcatggtcacggcgatcttctcgctgttcgcgctgttcagcacc
tattccggtatcaacgtcgaaggttcgctggtcaacgtgcgggtcattgccattatggcc
ggcggcattctgttcggcccctgggtgggtatcatcaccggcatcatcgccggggcgcat
cgctacctgattgatatcgatggcatcacctccgttccctgcctgatcaccagcatcatt
gccggcatctgcgccggttatatcaatcttaaagtgaagaaagagcaacgctggcgcgcc
ggcatcctcggcggcatgctgtgcgaaaccctgaccatgctgttgatcgtgctgtgggcc
aagccgaccgcgttggggctggatatcgtctccaagattgcactgccgatgatcctcggc
acggtgtgtatcggcctgattgtgctgctggtgcaaagcgtagaagacgaaaaagaagtg
atcgccgcccggcaagccaagctcgcgctggatattgcccgtaaaaccctgccctacttt
cgcaatatcaacagcgaaaccctggcgaccatctgcgacatcatccgccaggacatcaag
gccgacgcggtggcgatcaccgatactcaccgggtgatggcctatgtgggcgtgggggaa
gaggcttatccgattggccgcgaaggtttgagccgcgtgacccgcgaaagcatccgccac
ggcaagatcatcatcaaaaacaatctggaaaacccggccacgccgcaaattcactcgcag
ttggtgatcccgctgtgggaaaaaggcgaagtgagcggcgcgctgaaaatttactactgc
cacgcccatcagatcaccaatacgctaaaggtcatggcggtgggcctgtcgcagattatc
tccacccaaatggaggtctcgcgcattgagcacctgcgccagatggcggacaaagcggaa
atgcgcgcgctgcaaagcaagatcaatccgcacttcctgttcaatgccctgaacgccatt
tcttcgtcgatccgcatcaatccggacaccgcgcgccagctgattatcaacctgtcacgc
tacctgcgctataacctggagctgaacgacgaactgatcgatatccgcaaggaactgcac
caaatccaggattatatcgccatcgaacaggcacgatttggggccaaactgacggtaatt
tacgacatcgacgacgatatctcggtgcgtattcccagcctgttgatccaaccgctggtg
gagaatgccatcgtacacggcattcagccgtgcaaaggcaaaggcgtggtagtgattgcg
gtgaaggatcagggcgctcgggtcaagatttcggtaaaagacaccggtaacggcatcaat
caggaggtcatcgaccgggtggcgcgcaacgaaatgccgggccacaatatcggtctgttg
aacgtgcaccatcgggtgtcgttgctgtatggcgaagggttgcgtatccgtcggctggag
ccgggcaccgaaattgccttttacatcagcaaaaacggcggcaaactgcagatggaaagc
agcgtactgccggccggggagccatcatga
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