Sphingomonas sp. M1-B02: OKW87_08870
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Entry
OKW87_08870 CDS
T11063
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
spmb Sphingomonas sp. M1-B02
Pathway
spmb01501
beta-Lactam resistance
spmb01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OKW87_08870
01503 Cationic antimicrobial peptide (CAMP) resistance
OKW87_08870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spmb03036
]
OKW87_08870
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spmb02000
]
OKW87_08870
01504 Antimicrobial resistance genes [BR:
spmb01504
]
OKW87_08870
Chromosome and associated proteins [BR:
spmb03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
OKW87_08870
Transporters [BR:
spmb02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
OKW87_08870
Antimicrobial resistance genes [BR:
spmb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OKW87_08870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
UZK67940
LinkDB
All DBs
Position
1851806..1852969
Genome browser
AA seq
387 aa
AA seq
DB search
MAVALIVSACSSGEAEKSGGRGQTGPAQVGFVVVQPTSVPVVTELSGRVTAFQMSEVRPQ
VAGIIRERFFEEGSIVQAGQMLYQIDPSIYQAQVSEASANLQSARATAQAAQVRAERFRP
LAQMQAVSAQDYTDAAAQARQAQAAVAQSNAQLQTAQINLRFTKVPAPITGRIGRSLFTK
GALVTTNQTEPLAVIQRLDPIFVDIQQSSADLLSLRRALAAGGNAPTTAPVRLTLEDGSD
YGLTGTVEFSEVVVSENTGTVTLRARFANPQGLLLPGMFVRAAFAQAIDTQAFLVPQAGL
SRDPKGNATVYVVGPGNRAVARTVIATRTIGPNWVVTQGLAAGDRVIVQGTANLRPDAEL
RPVPVTTPQRIEAPKGGQSATAKAKGG
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggccgtggcattgattgttagcgcctgcagcagcggcgaggccgagaagagcggcgga
cgcggccagaccgggcccgcgcaggtcgggttcgtcgtcgtgcagcccaccagcgtgccg
gtcgtcaccgagctttcgggacgggtgaccgccttccagatgtccgaggtgcggccgcaa
gtggcggggatcatccgggaacgcttcttcgaggaaggatcgatcgtccaggcggggcag
atgctctaccagatcgatcccagcatctatcaggcgcaggtctccgaggcgtcggcgaac
ctgcagagcgcgcgcgccaccgcccaggcggcgcaggtgcgcgccgaacgcttccgtccg
ctcgcgcagatgcaagccgtcagcgcgcaggattataccgacgcggcggcccaggcccgt
caggcccaggcagcggtcgcgcaaagcaacgcccagctgcagaccgcccagatcaacctg
cgcttcaccaaggtgcctgcgccgatcaccggccgcatcgggcgatccttgttcaccaag
ggcgcgctggtcaccaccaaccagaccgaaccgcttgcggtcatccagcggctcgacccg
atattcgtcgacattcagcaatcctcggcggacctgctttcgctgcgccgcgcgctggcg
gccggcggcaacgctcccacgactgccccggtgcggctgacgctggaggacggcagcgat
tacgggctcaccggcacggtcgaattttcggaagtggtggtgagcgagaataccggaacg
gtgacactgcgggcgcgcttcgccaatccgcaggggctgctgctgccgggcatgttcgtc
cgcgcggcgtttgcgcaggcgatcgatacgcaggcgttcctggtcccccaggcggggctt
tcgcgcgatcccaagggcaatgcgacggtctatgtcgtcggcccgggcaaccgcgcggtg
gcccgcaccgtgatcgccacgcgcacgatcggcccgaactgggtggtgacgcaggggctg
gccgcgggcgacagggtgatcgtccagggcaccgccaatctgcgccccgacgccgaactc
cggccggttcccgtcactacgccgcagcggatcgaggcgccgaagggcggccagagcgca
acggccaaggccaaaggcggctga
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