Sphingomonas sp. M1-B02: OKW87_11155
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Entry
OKW87_11155 CDS
T11063
Name
(GenBank) class III extradiol dioxygenase subunit beta
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
spmb Sphingomonas sp. M1-B02
Pathway
spmb00362
Benzoate degradation
spmb00627
Aminobenzoate degradation
spmb01100
Metabolic pathways
spmb01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
OKW87_11155
00627 Aminobenzoate degradation
OKW87_11155
00624 Polycyclic aromatic hydrocarbon degradation
OKW87_11155
Enzymes [BR:
spmb01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
OKW87_11155
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Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
UZK65072
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All DBs
Position
complement(2325936..2326793)
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AA seq
285 aa
AA seq
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MARITAGVGTSHVPAIGAAIDHGKTGEPYWQPVLAGYEWTRIWEREVAKPDVVILVFNDH
ASAFDMRIIPTFAIGCGESFKPADEGWGPRPVPVVEGHPDLAWHIAQSLILDEFDMTIIN
EMDVDHGLTVPLSVVFGQVPAWPCKVIPLAVNVVTYPPPSGNRCWALGEAIARAVASYPE
DLNVQVWGTGGLSHQLQGTRAGLINRDWDNRFLDRLVGDSDELRRIPHLEYLRETGSEGI
EMVMWLIMRGAMGRTTRQLHRHYHVPASNTAVGHIVLEPVPTETG
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcatcaccgcaggtgtcggcaccagccacgtccccgcgatcggcgccgcgatc
gatcatggcaagaccggcgagccatattggcagccggtcctcgcgggctacgaatggacc
cgtatctgggaacgggaagtcgcgaaacccgacgtcgtcatcctggtcttcaacgatcat
gcctcggcattcgacatgcggatcatcccgaccttcgcgatcggctgcggcgaaagcttc
aagcccgccgacgagggctggggcccgcgcccggtgccggtggtggaaggccaccccgat
ctcgcctggcacattgcccagagcctgatactcgacgaattcgacatgacgatcatcaac
gagatggacgtcgatcacgggctgaccgtgccgctgtcggtggtgttcgggcaggtgccg
gcctggccgtgcaaggtaatcccgctggcagtcaacgtcgtcacctatccgccgccctcg
ggcaaccgctgctgggcgctcggcgaagcgatcgcccgcgccgtcgcgagctatcccgag
gatctcaacgtccaggtgtggggcaccggcgggctcagccaccagctccagggcacgcgc
gccgggctgatcaaccgcgactgggacaatcgcttcctcgaccgcctcgtcggcgacagc
gacgaactacgccggatcccgcatctcgaatatctgcgcgagaccggatcggaggggatc
gagatggtgatgtggctgatcatgcgcggcgcgatgggccggaccacccgccagctgcat
cgccattatcatgtgcccgccagcaacaccgccgtcggacatatcgtcctggagccggtg
ccgaccgaaaccggatga
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