Sphingobium sp. MI1205: K663_05710 Help Entry K663_05710        CDS       T04383                                  Name (GenBank) NAD-dependent DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism spmi  Sphingobium sp. MI1205 Pathway spmi03030   DNA replication spmi03410   Base excision repair spmi03420   Nucleotide excision repair spmi03430   Mismatch repair Brite KEGG Orthology (KO) [BR:spmi00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     K663_05710    03410 Base excision repair     K663_05710    03420 Nucleotide excision repair     K663_05710    03430 Mismatch repair     K663_05710  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:spmi03032]     K663_05710    03400 DNA repair and recombination proteins [BR:spmi03400]     K663_05710 Enzymes [BR:spmi01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      K663_05710 DNA replication proteins [BR:spmi03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      K663_05710 DNA repair and recombination proteins [BR:spmi03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      K663_05710    NER (nucleotide excision repair)     GGR (global genome repair) factors      K663_05710    MMR (mismatch excision repair)     DNA ligase      K663_05710   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       K663_05710 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB DNA_ligase_ZBD HHH_2 BRCT Nlig-Ia PTCB-BRCT DUF4796_N 5_3_exonuc Zn_ribbon_NUD Motif Other DBs NCBI-ProteinID:  AMK17527 UniProt:  A0A126R5W3 LinkDB All DBs Position 1:1192901..1195036 Genome browser AA seq 711 aa AA seqDB search MTDPKPMTEAEAANRLMRLAREIARHNRLYHDQDQPEITDAAYDALIRENNALEAAFPQL MRADSPNAQVGAAPTSGLKKVQHAVRMMSLDNGFSDEDIAEFIARVRRFLALAEDAPVAL TAEPKIDGLSCSLRYEKGELRLAATRGDGTTGEDVTANVRTIADIPERLTGSNIPDLFEV RGEVYMAKADFVALNARLLSEADDPEKARQFANPRNAAAGSLRQKDAAVTASRPLRFLAH GWGEASGLPAETQLGVMEAIGGWGLPVSDRLTRVETLDALIAHYRAIEAARADLPFDIDG VVYKVDRLDWQQRLGFVAKAPRWAIAHKFPAERAQTTLEAIDIQVGRTGKLTPVGRLTPV TVGGVVVSNVTLHNADEIARLGVRPGDRIVVQRAGDVIPQVVDNLTRDEARAAFNFPDHC PVCGSEAVREEGEVDIRCTGGLICGAQRFERLRHFVSRGALDIEGLGEKTIQEFLDLGWI AEPADIFRLKAHRAALLEREGWKEKSVDNLFAAIEAKREPDAARLLFGLGIRHVGAVTAR DLLKRYTNLPGIRALAEQIIALRDATVRAEGEEEARFRNRLDKGIAEMIGVENVGSAVGH ALADFFHEPHNRDAWDDLLSQVAPPDYVVETTASAVTGKTVVFTGKLETMSRDEAKAQAE RLGAKAAGSVSAKTDLVVAGPGAGSKLKQAAALGIEVIDEAAWAEIVKAAG NT seq 2136 nt NT seq  +upstreamnt  +downstreamnt atgactgatcccaagcccatgaccgaagccgaagcggccaatcgcctgatgcgtctcgcc agggagatcgcgcggcacaaccggctttatcatgaccaggatcagccggagattaccgac gccgcctatgatgcgctgatccgcgagaataatgcgctggaggcggcttttccgcagctg atgcgcgcggattcgcccaacgcgcaggtcggcgcagcgcccacttcgggattgaagaag gtgcagcatgccgtccgcatgatgagcctggacaacggcttttcggacgaggacattgcg gagttcatcgcgcgggtacggcgttttcttgcgctggccgaagatgcgccggtggcgctg acggcggagccgaagattgacgggctttcctgctccctgcgttacgagaagggcgaattg cggctggctgccacgcggggcgatgggacgaccggcgaggatgtgaccgccaatgtccgc accatcgccgatattcctgagcgcctgaccggctccaatatccccgacctgttcgaggtg cggggcgaagtctatatggcgaaggccgatttcgtggcgctgaatgcgcggctgctcagc gaggcggacgacccggaaaaggcgcgccagttcgccaatccgcgcaatgcggcggcggga tcgctgcggcagaaggacgccgccgtgaccgccagccgcccgctgcgcttcctggcccat ggttggggggaggcgagcggcctgccagcggagacgcagcttggcgtcatggaggcgata ggcggatggggcctgccggtgtccgaccgcctgacgcgggttgaaacgctggacgcgctg atcgcccattatcgcgccatcgaagccgcgcgagccgatctgcccttcgacattgatggc gtggtttacaaggtggatcggctggactggcagcagcggctgggcttcgtcgccaaggcg ccgcgctgggcgatcgcgcataaattccccgccgaacgggcgcagactacgctggaggcg atcgacattcaggtcgggcgcaccggcaagctgacgccggtggggcggttgacgccggtg acggtcggcggcgtggtggtgtccaacgtcacgcttcataatgccgacgagattgcgcgg ctgggcgtacggccaggcgaccgcatcgtggtgcagcgcgcaggcgacgtcatcccgcag gtggtcgataatctgactcgggatgaggcgcgggcggcgttcaattttcccgatcactgc ccggtgtgcgggtcggaagccgtgcgcgaggagggcgaggtcgatatccgctgcactggc gggctgatctgcggggcgcagcggttcgagcggctgcggcactttgtcagccggggcgcg ctggatatcgaagggcttggcgaaaagacgatccaggagtttctggacctgggctggatc gccgagcctgccgacattttccggctgaaggcgcatcgcgccgcgctgctggagcgcgag gggtggaaggagaagtcggtcgataacctgttcgccgcgatcgaggcgaagcgggagccg gacgcggcgcggctgctctttgggcttggcatccgccatgtcggggctgtgacggcgcgg gatctgctgaaacgctatacgaacttgcccggcatcagggcgctggcggagcagatcatc gccctgcgtgacgcgacggttcgggctgaaggcgaggaagaggcgcgtttccgcaaccgg ctggacaaggggattgccgagatgattggtgtggaaaatgtcgggtcggcggtggggcat gcgctggccgatttcttccatgagccgcataatcgcgatgcgtgggacgacctgttgtcg caggttgcgccgcccgattatgtggtggaaacgaccgccagcgcggtgactggcaagacg gtggtctttaccggcaagctggagacgatgagccgcgacgaggccaaggcgcaggcggaa cggttgggtgcgaaggcggctggatcggtgagcgccaagaccgacctggtggtggcaggg ccgggcgctggatcaaagctgaaacaggcggcggccctggggattgaggtgattgacgag gcggcttgggccgagatcgtgaaagcggcggggtag

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