KEGG   Sphingomonas sp. MS122: ACO227_07495
Entry
ACO227_07495      CDS       T11466                                 
Name
(GenBank) endonuclease III domain-containing protein
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
spms  Sphingomonas sp. MS122
Pathway
spms03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:spms00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    ACO227_07495
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spms03400]
    ACO227_07495
Enzymes [BR:spms01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     ACO227_07495
DNA repair and recombination proteins [BR:spms03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     ACO227_07495
 Prokaryotic type
     ACO227_07495
SSDB
Motif
Pfam: HhH-GPD Ogg-HhH HHH Lant_dehydr_C
Other DBs
NCBI-ProteinID: XRE11678
LinkDB
Position
complement(1557775..1558464)
AA seq 229 aa
MQAAFAFAAADVAGWRARLGPVALPRRRRSPVGQLVKSIISARTRDAVSIAAYERLVASY
GGPAALSRAAPAAVARTIGDVTFAQAKAAQLVAALRRIAAADGGFALGHLADRPLGDALA
WLEALPGVGRKVSASTLNASTLRRPVMIVDTHVLRVLQRLGFVPPAADYRAGSEAVTAAM
PSWTGDDFLGFHIALKRLGQAACRWDAPDCAACPLAPDCPAAARGGSLH
NT seq 690 nt   +upstreamnt  +downstreamnt
atgcaagccgctttcgcctttgcggcggcggacgtcgccggctggcgcgcgcggctgggt
ccggtcgccctgccgcgccggcggcgctcgccggtcgggcagctggtcaagtcgatcatc
agcgcgcggacccgcgacgcggtatcgatcgcggcctatgagcggctcgtcgcgagctat
ggcggacccgccgcgctgtcgcgggcggcgccggcggcggtcgcgcggacgatcggcgac
gtcaccttcgcgcaggccaaggcggcgcagctggtggcggcgctgcgccggatcgcggcg
gcggacggcggcttcgcgctcggtcacctggccgatcgcccgctcggcgacgcgctggcg
tggctggaggcgcttcccggcgtcgggcgcaaagtgtcggcatcgacgctcaacgccagc
acgctgcggcggccggtgatgatcgtcgacacgcatgtgctgcgcgtgctgcagcggctg
ggcttcgtgccgccggccgcggactatcgcgcgggcagcgaggcggtgaccgcggcgatg
ccgagctggaccggcgacgacttcctgggcttccacatcgcgctgaagcggctgggccag
gcggcgtgccggtgggatgcgccggattgcgcggcctgtccgctggcaccggactgcccg
gccgcggcgcggggcggaagtttacactag

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