Sphingomonas sp. NIBR02145: O3305_07810
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Entry
O3305_07810 CDS
T10953
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
spnb Sphingomonas sp. NIBR02145
Pathway
spnb00300
Lysine biosynthesis
spnb00550
Peptidoglycan biosynthesis
spnb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
O3305_07810
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
O3305_07810
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spnb01011
]
O3305_07810
Enzymes [BR:
spnb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
O3305_07810
Peptidoglycan biosynthesis and degradation proteins [BR:
spnb01011
]
Precursor biosynthesis
Amino acid ligase
O3305_07810
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
TusA
VP1_protrusion
Motif
Other DBs
NCBI-ProteinID:
WHU04485
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Position
complement(1743346..1744764)
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AA seq
472 aa
AA seq
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MKLGALTGGGEDAVVTGFAIDHRKVAPGTIFGAFEGARFNGEDFIADAVKAGAVAIVARP
GAKVEGVLHIADDNPREKFARLAAAFFAPFPGTAVAVTGTNGKTSTVEMTRQLWRMRGFH
AASIGTLGVTTADDTVSTGLTTPDIVTFLSNVAGLAREGVSHVAFEASSHGLSQYRTEGL
PVKAAAFTNLSRDHLDYHGDMETYFHAKMRLFADVLDLDGGTAVVWADDPNAPRIEDLAR
QRGNKLVTVGEHGSTLRLVGREPTLLGQGLTIEAEGQTYKVNLPLIGAYQAANALVAAGL
VVATGGDVAQTLSDLSRLQPVRGRLERAVITKVGAPVYVDYAHTPDALEAAIAALKPHTR
GRLIIVFGAGGDRDTGKRAPMGQAATAGADVVIVTDDNPRSEDPAAIRAQVLEGAPGAIE
IGGRREAIKAAIDMAGSEDIVLVAGKGHEQGQIVGDMVLPFDDVSVARESAA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgggcgcgctgacgggaggcggggaagacgccgtcgtcaccggatttgccatc
gaccatcgcaaggtcgcccccggaaccatattcggcgcgttcgaaggggcgcgcttcaac
ggtgaggacttcatcgccgatgccgtgaaggccggtgccgtcgccatcgtcgcccggccg
ggcgcgaaggtggaaggcgtgttgcatatcgccgacgacaatccgcgcgagaagttcgcc
cggctggcggcggcgttcttcgcgccgttcccggggaccgcggtggcggtgaccgggacc
aacggcaagacctcgaccgtcgagatgacccggcagctgtggcggatgcgcggcttccat
gccgcctcgatcggcacgctgggggtgaccacggcggacgatacggtttcgacgggcctg
accacgccggatatcgtgaccttcctctccaacgtcgccgggctggcgcgcgagggcgtg
agccatgtcgcgttcgaggcttcgtcgcacgggctctcgcaataccggaccgaggggctg
ccggtgaaggcggcggcgttcaccaacctcagccgcgaccacctcgactatcacggcgac
atggaaacctatttccacgccaagatgcggctgttcgccgatgtgctcgacctggacggc
ggcaccgcggtggtgtgggcggacgatcccaatgcgccgcggatcgaggacctggcgcgg
cagcggggcaacaagctggtcacggtgggcgagcatggctcgacgctgcggctggtgggt
cgcgagccgaccctgctcggccagggactgacgatcgaggccgagggccagacctacaag
gtgaatttgccgctgatcggcgcgtaccaagcagccaatgcgctggtcgcggccgggctg
gtggtggcgactggcggggacgtggcgcagacgctgagcgatctcagccggctgcagccg
gtgcgcgggcggctcgagcgcgcggtgatcaccaaggtcggcgcgccggtctatgtcgat
tacgcgcataccccggatgcgctggaggcggcgatcgcggcgctcaagccgcataccagg
ggcaggctgatcatcgtgttcggcgcgggcggcgaccgcgataccggcaagcgcgccccg
atggggcaggcggcgacggcgggtgccgacgtggtgatcgtcaccgacgacaatccgcgc
tccgaggatccggcggcgatccgcgcccaggtgctcgaaggggcgccgggggcgatcgag
atcggcgggcgccgcgaagcgatcaaggcggcgatcgacatggcgggcagcgaggacatc
gtgctggtcgccggcaagggacatgagcagggccagatcgtcggcgacatggtgctgccg
ttcgacgatgtcagcgtggcgcgggagagcgcggcgtga
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