Sphingomonas sp. NIBR02145: O3305_21770
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Entry
O3305_21770 CDS
T10953
Name
(GenBank) M15 family metallopeptidase
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
spnb Sphingomonas sp. NIBR02145
Pathway
spnb00550
Peptidoglycan biosynthesis
spnb01100
Metabolic pathways
spnb01502
Vancomycin resistance
spnb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
spnb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
O3305_21770
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
O3305_21770
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
O3305_21770
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spnb01002
]
O3305_21770
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spnb01011
]
O3305_21770
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
spnb01504
]
O3305_21770
Enzymes [BR:
spnb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
O3305_21770
Peptidases and inhibitors [BR:
spnb01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
O3305_21770
Peptidoglycan biosynthesis and degradation proteins [BR:
spnb01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
O3305_21770
Antimicrobial resistance genes [BR:
spnb01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
O3305_21770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
NeuB
Motif
Other DBs
NCBI-ProteinID:
WHU02773
LinkDB
All DBs
Position
complement(4719723..4720490)
Genome browser
AA seq
255 aa
AA seq
DB search
MRLSALILLSLAPLAAHAEEDVAAPPATASATRLFNHLPYGELEAAALLPVPSLPGCMMA
RDAVFDVERLLSAARAEGIELGAISCFRSIQHQRRVFCAGAGNCDAVAALRARFVAPPGY
SEHATGYAIDFVQRGGDCRAVEQCFALTPGGQWLMRRAPEFGFELSFPAGNKQGVGWEPW
HWRWVGASAARARFAPARASFPALPAVPRADTKTAAGPFVQPPSGETAPGGGNYAVSVSR
WGAAILLASSATLRP
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctttcggccctgatcctgctctcgctcgcgcccctggcggcccacgccgaggaa
gacgtggcggcgccgccagccaccgcatcggcaacccggctgttcaaccatcttccctat
ggcgagctggaagccgcggcgctgctgcccgtccccagcctgccgggatgcatgatggcg
cgcgatgcggtgttcgatgtcgagcgcctgctttccgccgcgcgtgccgaagggatagag
ctcggcgcgatctcgtgcttccgttcgatccagcaccagcgccgggtgttctgcgccggc
gcgggcaattgcgacgctgtggcggcgctgcgggcgcgcttcgtcgccccgccgggctat
agcgagcatgccaccggctacgcgatcgacttcgtccagaggggcggcgattgccgggcg
gtcgagcaatgctttgcgcttacgccgggcgggcaatggctgatgcgccgcgcgcccgaa
tttggcttcgagctatcctttccggccggcaacaagcagggcgtgggctgggagccctgg
cactggcgctgggtcggcgcatccgccgcccgcgcccgcttcgcaccggcccgggcgagc
tttcccgctttgcccgccgtgccgcgcgcagatacgaaaacggcggctggaccattcgtc
cagccgccgtccggcgaaaccgcgccaggaggggggaattacgcggtttcggtctcgcgg
tggggagccgcgatcttgttggccagctcggcgaccttgcggccctga
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