Schizosaccharomyces pombe (fission yeast): 2538860
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Entry
2538860 CDS
T00076
Symbol
rhp16, SPOM_SPCC330.01C
Name
(RefSeq) ATP-dependent helicase
KO
K15083
DNA repair protein RAD16
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spo03400
]
2538860 (rhp16)
DNA repair and recombination proteins [BR:
spo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
2538860 (rhp16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-C3HC4
ResIII
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_IRF-2BP1_2
Nairovirus_NSm
zf-C3HC4_4
zf-C3HC4_3
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
2538860
NCBI-ProteinID:
NP_587701
UniProt:
P79051
LinkDB
All DBs
Position
III:complement(102685..105576)
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AA seq
963 aa
AA seq
DB search
MHISTLKVDQLQNEAVDINSNDTIDSINWKNTRNNHTTQASLQADNNDEQSNGQAPFSTT
YSEINNIHDVPGNQDEWSSSPIAGIIVESEDEEVVENNLHSQMGTSCNKINSNSNKGKEN
MHFVLDDNGDSKGNASNQQVERDDKLDMETTRWNGKEFEEPLSTNKKLIIQSNNTSSQHS
TPPLSISDTSTHTGSSTDNVEANPNTGFSSARKRSLRSSNLKKKFVPLSSPEESNESEFI
DDDESDEVASIIDIKEDETFDSKVEIPEAAPSSSTESDEESIPLSYQSKRRRVSARASSS
ASSSSRTQAKSIPSHERTHYRLIRQHPELEHVWEKLEEEAPREVKQIEQPKELVLNLLPF
QREGVYWLKRQEDSSFGGGILADEMGMGKTIQTIALLLSEPRGKPTLVVAPVVAIMQWKE
EIDTHTNKALSTYLYYGQARDISGEELSSYDVVLTSYNVIESVYRKERSGFRRKNGVVKE
KSLLHQMEFYRIILDEAHGIKSRTCNTARAVCGLRTTRKICLSGTPLQNRIGELFSLLRF
LRADPFAYYYCLQCECKSLHWRFSDRSNCDECGHKPMSHTCYFNAEMLKPIQKFGYEGPG
KLAFKKVHSLLKHIMLRRTKLERADDLGLPPRVVEVRKDLFNEEEEDVYQSLYMDSKRKF
NTYLAEGVVLNNYANIFQLITRMRQMADHPDLVLASKRKTVDIENQENIVCKICDEVAQD
AIESRCHHTFCRLCVTEYINAAGDGENVNCPSCFIPLSIDLSAPALEDFSEEKFKNASIL
NRIDMNSWRSSTKIEALVEELYLLRKKDRTLKSIVFSQFTSMLDLIHWRLRKAGFNCVKL
DGGMTPKARAATIEAFSNDINITIFLVSLKAGGVALNLTEASQVFMMDPWWNGAVQWQAM
DRIHRIGQKRPIKVITLCIENSIESKIIELQEKKAQMIHATIDQDEKALNQLSVEDMQFL
FSN
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgcatatatctactctaaaagtggaccaattacaaaatgaagctgtagatattaattca
aacgatacaattgattccataaattggaaaaatactcgcaataaccatactactcaggcg
tctcttcaagcagacaataatgatgagcaaagtaatgggcaggctccattttctactact
tattcagagataaataacattcatgatgtaccaggcaatcaagatgaatggtcatcttct
cccattgcgggcattattgtagaaagtgaagatgaggaagtggttgaaaacaatttacat
tcacaaatggggacgtcatgtaataaaataaactcgaatagtaataagggaaaagaaaat
atgcattttgttctagatgataatggtgattcaaaggggaatgcttcaaatcaacaagtc
gagcgtgacgacaagttagatatggagacaacgcgctggaacggaaaagagtttgaagaa
cctctgtcaacaaacaaaaaattgattatccagtcaaacaacacctcatctcaacattcg
acacccccattatccatttctgataccagtacacacaccggtagcagcacagacaatgta
gaagcaaatcccaatacaggtttttctagtgccagaaaacgttcattaaggtcctcgaat
ttgaaaaaaaagtttgtgccattgtcatctccagaagaatctaatgaatccgaatttatt
gatgatgatgaaagtgatgaagttgctagcataattgatatcaaagaggatgaaactttt
gatagtaaagtagaaattccagaagctgctccaagttcttctacggaaagtgatgaagag
tcaatccctttaagttaccagtccaaacgaaggagggtatccgctagggcttcttcttcc
gcgtcctcttcctctagaacacaagcaaaatcaattccatcacatgaaagaacccattat
cgtctgattcgacaacatcctgaactagaacatgtttgggagaaattggaagaagaagca
cctcgtgaagtgaaacagatcgagcaacccaaagagttggtcctaaaccttctccctttt
caacgagaaggtgtatattggttaaaacgacaagaagattcctcttttggtggaggaatc
ttggccgatgaaatgggtatgggtaagactattcaaacaattgcgttgttgctttcagaa
cctcgaggtaagccaaccttggttgttgctccggttgtagcaattatgcaatggaaagaa
gagattgatacacataccaataaagcactgagtacatatctttattatggccaggctcgt
gatatttcaggagaagagctttcgagctatgatgttgtactaacgagttacaatgtaatt
gaatcagtttacaggaaggaacgcagcggattcagaaggaaaaacggtgttgtaaaagaa
aagtcattacttcatcaaatggagttttaccgaattatacttgatgaggcccatggtatc
aaatcaaggacttgtaacactgccagagctgtttgtggcttaagaacgacaagaaagata
tgtctttcaggaacacctttgcaaaaccgtattggagaattattttcacttcttcggttc
ctacgggcagatccttttgcttactactattgcttgcaatgtgaatgtaaatctctgcac
tggagattttccgatagaagtaattgcgacgaatgcggccataaaccaatgagtcatact
tgctattttaacgctgaaatgctaaaaccaatacaaaagtttggatacgaaggtccagga
aagctagcttttaaaaaggtgcattctttattaaaacacattatgttacgtcgaacaaaa
ttagagagggctgatgaccttggattacctcctcgagtcgttgaagtgaggaaagattta
ttcaacgaagaagaggaagatgtataccaatctttatatatggattcaaaaagaaaattt
aatacatatcttgctgaaggtgtcgttttgaataattatgcaaacattttccagctaatt
acacgaatgcgccaaatggcagatcatcctgacctggtgttagctagcaaacgaaaaaca
gttgatattgaaaatcaggaaaatatcgtctgtaagatttgtgacgaagtcgctcaagat
gctatagaatcacgttgccatcacacattttgtcgactctgcgttacggaatatatcaat
gcagctggtgatggagaaaatgtcaactgtccaagttgtttcattcccttaagcatagat
cttagtgcccctgctttagaagatttttctgaagagaagtttaagaatgcatcgattttg
aatagaattgatatgaatagttggcgttcatctacaaaaattgaagcattagttgaggag
ctttacttacttcgtaagaaggaccgaacactgaagtcgattgttttctctcaatttact
tctatgttagatctcattcattggcgacttcgaaaagccgggtttaattgtgtaaagcta
gatggtggtatgacccccaaagcgagagcagctactattgaggctttcagtaacgatatt
aatattaccatttttctagtttcgttgaaagcaggtggtgttgctttgaaccttacagag
gcatctcaagtgtttatgatggatccttggtggaatggagctgtacagtggcaggcaatg
gatcgaattcatcgtattggacaaaaaaggccgataaaagtaattaccctgtgtattgaa
aattccattgaaagcaaaattattgaactacaagaaaagaaagctcagatgatacatgca
accatagatcaagacgaaaaggctttgaaccagctttctgtcgaggatatgcaattcttg
ttctcaaattag
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