Schizosaccharomyces pombe (fission yeast): 2539143
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Entry
2539143 CDS
T00076
Symbol
fxn1, SPOM_SPCC1183.03C
Name
(RefSeq) frataxin
KO
K19054
frataxin [EC:
1.16.3.1
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo00860
Porphyrin metabolism
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
2539143 (fxn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
spo03029
]
2539143 (fxn1)
Enzymes [BR:
spo01000
]
1. Oxidoreductases
1.16 Oxidizing metal ions
1.16.3 With oxygen as acceptor
1.16.3.1 ferroxidase
2539143 (fxn1)
Mitochondrial biogenesis [BR:
spo03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
2539143 (fxn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Frataxin_Cyay
Motif
Other DBs
NCBI-GeneID:
2539143
NCBI-ProteinID:
NP_587886
PomBase:
SPCC1183.03c
SPCC1183.03c.1
UniProt:
O74831
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All DBs
Position
III:complement(join(596368..596512,596667..596761,596842..597078))
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AA seq
158 aa
AA seq
DB search
MQSLRAAFRRRTPIFLKPYEFSTNVFGLRCRYYSQVRHNGALTDLEYHRVADDTLDVLND
TFEDLLEEVGKKDYDIQYANGVITLMLGEKGTYVINKQPPAHQIWLSSPVSGPKHYEYSL
KSKTWCSTRDEGTLLGILSSEFSKWFSRPIEFKKSEDF
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctttgcgagcagcctttcgcagacgaaccccaatttttttgaagccttatgaa
ttctcgactaatgtttttgggctacgctgtaggtattattcacaagtacggcataatgga
gctttgacggatcttgagtatcatcgagttgcagatgacacccttgatgtcttaaatgat
acatttgaggatttattagaagaagtaggaaaaaaagattatgatattcaatatgctaat
ggagtaattactcttatgcttggtgaaaaggggacttatgtaataaataagcagcctcct
gctcatcaaatttggctttcatccccagtaagtggtcccaaacattatgaatattctctc
aaatcaaaaacttggtgttcaacccgtgatgaagggactctactaggaatcttatcgagc
gaattcagtaaatggttttcgcgacccattgagttcaaaaagtccgaagatttttag
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