Schizosaccharomyces pombe (fission yeast): 2539432
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Entry
2539432 CDS
T00076
Symbol
thp1, SPOM_SPCC965.05C
Name
(RefSeq) uracil DNA N-glycosylase Thp1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
2539432 (thp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spo03400
]
2539432 (thp1)
Enzymes [BR:
spo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
2539432 (thp1)
DNA repair and recombination proteins [BR:
spo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
2539432 (thp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
2539432
NCBI-ProteinID:
NP_588515
UniProt:
O59825
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All DBs
Position
III:complement(2291004..2291981)
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AA seq
325 aa
AA seq
DB search
MNDIETRDTGTKNDNSSEFNLSVKSHKRKRSFDDENLELEESREETSGGILKKAKTQSFS
ESLERFRFAHAGSNNEYRKTDVVKNSDTDNGLLKSAVETITLENGLRNRRVNVTKKSTLK
ASVKKSTLKKKNEVDPALLQGVPDYICENPYAIIVGLNPGITSSLKGHAFASPSNRFWKM
LNKSKLLEGNAEFTYLNDKDLPAHGLGITNLCARPSSSGADLRKEEMQDGARILYEKVKR
YRPQVGLFISGKGIWEEMYKMLTGKKLPKTFVFGWQPEKFGDANVFVGISSSGRAAGYSD
EKKQNLWNLFAEEVNRHREIVKHAV
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacattgagacgagagacacaggaacgaagaatgataacagctcagaatttaat
ttatcggtaaaaagtcacaaaagaaaaaggagttttgatgacgaaaatttggagctcgaa
gagagtcgtgaagaaaccagtggtgggattttgaagaaggcgaaaacccaaagtttctcg
gagtctctagaacgattccgctttgctcatgcaggaagcaataatgagtatcgtaaaaca
gatgtcgtgaagaattctgatacagacaacgggttgttaaagtcagcggttgagacaatt
acgcttgaaaatggcttaagaaatcgtagggttaatgtaactaagaaaagtaccctcaaa
gcatctgttaagaaaagcacgcttaaaaagaagaatgaggtggaccctgcgttattgcag
ggggttccagattacatttgcgagaatccgtatgccatcattgtcggactcaatccaggt
attacttcttctcttaaaggacacgcatttgcttcacctagcaatagattttggaaaatg
cttaataaaagcaaacttttggagggaaatgccgaattcacgtaccttaacgataaagat
ttacctgctcatggtttaggtataactaatctttgtgcgagaccttcgtctagtggagcg
gatctacgcaaagaggaaatgcaagatggtgctcgtattctttatgaaaaggttaagcgg
taccgtcctcaagtaggcttgttcatttccgggaaaggcatatgggaggaaatgtataaa
atgcttacaggaaaaaaattgcccaagacctttgtttttggatggcagccagagaaattt
ggggatgcaaacgtgtttgtcggtattagctcgagtggccgtgctgcaggctactctgat
gaaaaaaagcaaaatctttggaacctttttgccgaagaagtgaacaggcatcgagaaata
gtgaaacatgcagtctaa
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integrated database retrieval system
