Schizosaccharomyces pombe (fission yeast): 2543510
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Entry
2543510 CDS
T00076
Symbol
nth1, SPOM_SPAC30D11.07
Name
(RefSeq) DNA endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
2543510 (nth1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spo03400
]
2543510 (nth1)
Enzymes [BR:
spo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
2543510 (nth1)
DNA repair and recombination proteins [BR:
spo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
2543510 (nth1)
Prokaryotic type
2543510 (nth1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
2543510
NCBI-ProteinID:
NP_593210
PomBase:
SPAC30D11.07
SPAC30D11.07.1
UniProt:
Q09907
LinkDB
All DBs
Position
I:complement(1106773..1107840)
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AA seq
355 aa
AA seq
DB search
MSKDYGTPPENWREVYDEICKMKAKVVAPVDVQGCHTLGERNDPKKFRFQTLVALMLSSQ
TKDIVLGPTMRNLKEKLAGGLCLEDIQNIDEVSLNKLIEKVGFHNRKTIYLKQMARILSE
KFQGDIPDTVEDLMTLPGVGPKMGYLCMSIAWNKTVGIGVDVHVHRICNLLHWCNTKTEE
QTRAALQSWLPKELWFELNHTLVGFGQTICLPRGRRCDMCTLSSKGLCPSAFKEKSGITI
TKRKVKTIKRVKKRPASESPPLSPLSLPTDDLYYQSIEDKSLIKLEDLDPVDSISHMNEP
LKKEPAADIDVDQKPPVAFHSTTKETRSLRRSKRVAKKSSQYFSQQSLQDIEDLV
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagactacggaactcctcctgagaactggagggaggtttacgatgaaatttgt
aaaatgaaagccaaggtcgtagcgcctgtagacgttcagggttgtcatacattaggagaa
cgtaatgatccaaaaaaatttcgatttcaaacactggtggcattgatgctttctagccaa
acaaaagatatagtactgggtcctaccatgcgaaacttaaaagaaaaattagctggagga
ctttgtttagaagatatccaaaatattgatgaagtttctctaaataaactaatcgagaaa
gttggttttcataaccgaaaaaccatttatttgaaacaaatggcacgtattttatcagaa
aagttccaaggagatattccggacaccgtagaagacctaatgactctcccaggtgtgggg
cctaaaatgggatatctatgtatgagtattgcatggaataaaactgttggaattggagta
gatgttcacgtacatcgtatatgtaatcttcttcattggtgtaatacgaaaactgaagaa
cagactagagctgctttgcaaagctggctgcctaaggaattatggtttgagctgaaccat
acacttgtcggttttgggcaaacaatctgtttaccaagaggaaggcgctgtgatatgtgt
actttatcttctaagggcttgtgtcctagcgcctttaaagaaaaaagtggcatcacaata
actaagagaaaagtcaaaacgattaaaagagtcaaaaaaagacctgcttctgagtcacct
cctctatctccactctcccttcctacagatgatttgtattaccaaagcatcgaagataaa
tcacttataaaacttgaggacttggaccctgttgatagtatatcacacatgaatgaacct
ttgaaaaaagaaccagccgctgatattgatgtagatcagaagccacctgtcgcattccat
tcaactacaaaagaaactaggtcactgcgcaggtcaaagcgagttgcaaaaaaatcatcc
cagtatttctcccaacaaagtttacaagatattgaagatctggtttaa
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