Sphingopyxis sp. OPL5: EEB18_009335
Help
Entry
EEB18_009335 CDS
T10726
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
spog Sphingopyxis sp. OPL5
Pathway
spog03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EEB18_009335 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spog03400
]
EEB18_009335 (nth)
Enzymes [BR:
spog01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EEB18_009335 (nth)
DNA repair and recombination proteins [BR:
spog03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EEB18_009335 (nth)
Prokaryotic type
EEB18_009335 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QNO29106
LinkDB
All DBs
Position
complement(1950403..1951062)
Genome browser
AA seq
219 aa
AA seq
DB search
MKKADIFEFYRRLAELNPSPETELQFGNTYQLLVAVVLSAQATDVGVNKATRLLFQEVKT
PRQMVDLGEEGLKQHIKTIGLFNAKAKNVIALSEILVRDFGGEVPADRDTLVELPGVGRK
TANVVMNCAFGAETFAVDTHIFRVGNRTGLAPGKTVLGVEKKLDKDTPGPFRVGAHHWLI
LHGRYICKARTPECWRCPVDDLCRFKPKTPAPKAKKIAA
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggccgatatcttcgaattctaccgccgcctcgccgaactgaaccccagtccc
gagaccgagcttcagttcggcaacacctatcagttgctcgtcgcggtggtgctgtcggcg
caggcgaccgacgtcggggtgaacaaggcgacgcgcctgctgtttcaggaggtgaagacc
ccgcggcagatggtcgatctcggcgaagaggggctcaagcagcacatcaagacgatcggg
ctgttcaacgccaaggcgaagaatgtcatcgcactcagcgaaatcctcgtccgcgacttc
ggcggcgaggtgcccgccgaccgcgacacgctcgtcgaactcccgggcgtcgggcgcaag
accgccaatgtcgtgatgaactgcgccttcggggctgagaccttcgcggtcgacacccac
atcttccgtgtcggcaaccgcaccggcctcgcgccgggcaagaccgtgcttggcgtcgaa
aagaagctcgacaaggacacgcccggacccttccgcgtcggcgcccaccattggctgatc
ctccacggccgctacatctgcaaggcgcgcacccccgaatgctggcgctgcccggtcgac
gatttgtgccggttcaagccgaagaccccggcgccgaaagcgaagaagatcgcggcttga
DBGET
integrated database retrieval system
