Spongiibacter sp. IMCC21906: IMCC21906_02419
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Entry
IMCC21906_02419 CDS
T03945
Name
(GenBank) RND family efflux transporter, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
spoi
Spongiibacter sp. IMCC21906
Pathway
spoi01501
beta-Lactam resistance
spoi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spoi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IMCC21906_02419
01503 Cationic antimicrobial peptide (CAMP) resistance
IMCC21906_02419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spoi03036
]
IMCC21906_02419
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spoi02000
]
IMCC21906_02419
01504 Antimicrobial resistance genes [BR:
spoi01504
]
IMCC21906_02419
Chromosome and associated proteins [BR:
spoi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
IMCC21906_02419
Transporters [BR:
spoi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IMCC21906_02419
Antimicrobial resistance genes [BR:
spoi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IMCC21906_02419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
AKH70075
UniProt:
A0A0F7M3M5
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All DBs
Position
complement(2578170..2579330)
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AA seq
386 aa
AA seq
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MSKRMIILLSLAVLAFGGVVGMKWFSNKMMNDFLNDMPTPPVTTTSATVERSQWDNTLTA
VGSLVAVNGADLASEVDGVVKAIHFESGQHVEKGSLLIELDSAVEQGELNRLEAQGDLAE
LDSKRIEKLFKRGSISKSEYDKAMAETKVAVASAAAQRGRVAQKQIRAPFSGQLGIRRVN
VGQYLSPGQFVVTLQALHPIDVDFTLPESELGQVEEGLTIAMKLDGYADETFAGELIAID
PKVNPNTRNFDLRGRIPNEDMRLKPGQFAQLTLNLPGSADVLVLPRTAINYASYGATVFV
IEKNPEAGPPPEEPDPSAPPYTDLLVKQRFVSLGKARGDYVEITSGLEEGTKVASSGLLK
LRSGQPVIIDNAMRPNTSLEPSPPES
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacggatgatcattttgttgtcgcttgcagtgcttgcctttggcggcgttgtg
ggcatgaagtggttcagcaataagatgatgaatgattttctgaatgacatgccaacgcct
ccggttaccacgacctcggccacggttgagcgcagtcagtgggacaacacgttaacggcg
gtaggctcactggttgctgtaaacggtgcagatctggcaagcgaagtggatggtgtggtt
aaggcgattcattttgaatcgggccagcatgttgaaaaaggcagcttgttgattgagctt
gattcagcagtagagcagggtgagttgaatcgcttggaggctcagggcgatttggctgag
ctggatagcaagcgcattgagaaattgtttaagcgtggctctatctctaaatctgaatac
gataaggcaatggccgagacaaaagtggcagtagcgtcggcagcggcacagcgtggtcgg
gttgctcaaaaacagattcgcgcgcctttttctggtcagcttggtattcgtcgagtcaat
gttggccagtatttaagtcctggccagtttgtggtgacattgcaggcgcttcaccctatc
gatgtagatttcaccttgcctgaaagcgagcttggccaagttgaagaagggctaacgatt
gcaatgaagctggatggctacgctgacgagacctttgctggtgaattgattgccattgac
ccgaaggtgaaccccaacactcgcaactttgaccttcgcggtcgtattcccaatgaggat
atgcgcctcaagcctggccagtttgcgcaattaaccttaaatctgcctggcagtgccgac
gttttagtcctaccccgtacggcgattaactacgcttcttatggcgcgacggtctttgtt
atagaaaaaaatcctgaggccgggccgccaccggaagagcccgatcccagtgcaccgcct
tataccgacctattggttaaacagcgttttgtcagtctgggtaaagccagaggtgattat
gttgagattaccagtggtttagaagaagggactaaagtggccagctcgggcttattgaaa
ttgcgcagtggccagccggtgattatcgataatgcaatgcgccctaatacctctttggag
ccatctccgccggaaagctaa
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