Shewanella polaris: FH971_18690
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Entry
FH971_18690 CDS
T06579
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
spol
Shewanella polaris
Pathway
spol01501
beta-Lactam resistance
spol01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FH971_18690
01503 Cationic antimicrobial peptide (CAMP) resistance
FH971_18690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spol02000
]
FH971_18690
01504 Antimicrobial resistance genes [BR:
spol01504
]
FH971_18690
Transporters [BR:
spol02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
FH971_18690
Antimicrobial resistance genes [BR:
spol01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FH971_18690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
Motif
Other DBs
NCBI-ProteinID:
QDE32813
UniProt:
A0A4Y5YK00
LinkDB
All DBs
Position
4281706..4284768
Genome browser
AA seq
1020 aa
AA seq
DB search
MFNYFYHRSYLTFALIIALFIIGVMGLISMPKNLFPDSDRPTIIVITQISGATAKVAAST
VSKPIEEEISRLAMIREVSSVNVANFSIVKGEFEYEKGLDAAAVDVNNALSIASSKLPAG
ANPAIYTSGAFTRPVEVITLSSKNSNLTLPDLRKIADSFIKPYLLSKPDIGNVEVFGGYQ
SAINIELDPLKAKKYGLDFNKVANVITATNKDMPLGFLKGKNGFFTLTYYGDHADIDSVK
NIFVAPNVHLKDIAKVKWGYQKRFSGYMGNGKEGIAMAVQRAPGGSVLDVSKATRTELEK
LKVQYPNIEFQISDTQRDLIETANDNMLEALRDAVIYTLIVMMFFLGNFRAIIAAGLSIP
LVFFGTIAIIYLFGGELNIVVYTAIILALGMLVDDAVVVLENIERHISEVKEDLNTAIEE
GTKEVLSPIFSGTVATIVIMFPLMFVGDFPQHIFRPLISTLIIALLVSYFLSITFIPKLS
LYLYKNGTQKNRIEKFFERLYQASFGRLVAPYISILHFTNGRYAVWRKLLLTVGVLALLI
ISVSNIMPIIGKDTMPPMDTGIIKAHIVFSANDRVEDSEAKMKPFLTWLHQQPEVTMSSV
AFGSETGVLSLGSGNLPSEAIITINCVNRFQRKKSLWTIEDEIRDQLHTLLGIKTVEVYD
FGATPMSSIKAPLDVRITSSDFENLPEMAEKVAQALAPIKGLTSITQSWASDFNELKVDI
DTNKALSYGLTPAAIAEQIPINGRILSMSGSLSSMSTQYVRLYLKGSFSEDIQSLKSMLI
QTPAGDELPLTALATISNNLTQAKIERDQMLYSIDVNGFRTTRPVTHITSDAIEALKTVN
TAGYNVTQQGDIISLNDSFTRMIKAIATGIVILAITLIVIYRSVGLGLIMIVVLPLSLIG
ASWGMLLFDKPSCMPSLIGILLLFGIIIKNAVLLVDFYQDFRKKESPFESAVESVRVRFR
PVMMTAFGTIAGMIPIALEQAVGLERLSPLADVAIGGLIVGTLLTLVYVPMFAYGFDRDK
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgtttaattatttttatcaccgttcttacctgacttttgcactgattatcgctttgttt
attatcggcgtaatgggattaatttccatgccgaaaaacctattcccagattcagatcgt
cctaccattatcgtcatcacacaaatctcaggcgccacagcaaaggttgcggcatcaacg
gtctccaaacccatcgaagaggagatatctcggcttgcaatgatccgcgaagttagctcg
gttaatgtggcaaacttttctattgttaaaggtgagtttgaatatgaaaaaggattagat
gctgctgcggttgatgttaacaatgcactatcgatagcaagcagtaaattacccgctggc
gcaaacccagcaatttatacttctggtgcttttactcggcctgtcgaagtgattacatta
tcttcaaaaaacagtaatttgaccttacccgatttacgtaaaatagccgacagctttata
aagccttatcttctaagtaaacctgatattggtaatgtagaagtttttggtggctatcaa
agtgcgattaatatcgaacttgacccacttaaagctaaaaaatatggtttagattttaac
aaagtcgccaatgttattactgccacaaacaaagatatgccgctagggtttcttaaaggt
aaaaatggctttttcactctgacctattacggcgatcatgccgatattgatagtgtaaaa
aacatatttgttgcgcctaatgttcatttaaaagatattgccaaagtcaaatggggttac
caaaaacgctttagtggttatatgggtaacggcaaagaaggtatcgccatggcagtgcaa
cgagctcccggtggcagtgtactcgatgttagcaaggcgacacggaccgaacttgaaaaa
ctaaaagtacaataccccaatatcgaatttcaaattagtgatactcaacgcgacctcatc
gaaaccgcaaacgataatatgctggaagcattacgtgatgccgttatttataccctgatt
gtaatgatgttttttctcggtaacttccgtgcaattattgctgcaggcttatcgatccca
ctggtcttttttggcaccatagcaattatttacttattcggtggagagctgaatattgtg
gtctataccgccatcatcttagcactcggcatgttggttgatgatgcagttgtggttctt
gaaaatatcgaacggcatataagcgaggtcaaagaggatttaaacaccgcgattgaagaa
ggtaccaaagaagttctgtctccgatattttccggcaccgtcgcgaccatcgtaatcatg
tttccgctgatgtttgtcggtgatttcccgcagcatatctttagacccttaatatcaaca
ctgatcatcgcactgctcgtttcgtattttctatcaataacctttattccaaaattatcg
ttatacctctataaaaatggtactcaaaaaaatcgtatcgaaaaattttttgaacgactt
taccaagcctctttcggacgcttagtcgccccttatatcagtattctgcattttaccaat
ggccgttacgcggtgtggcgcaaactattgttaaccgtcggtgtactggccttactgatt
attagtgtgtcaaacattatgcccattatcggcaaagacactatgccgccgatggacact
gggattatcaaagcccacattgtcttcagcgccaatgaccgcgtagaagactcagaagcc
aaaatgaaaccctttttaacttggttacatcagcaaccagaagtcaccatgagttcagtc
gccttcggttctgaaacaggggtattatcattaggcagtggtaatttaccaagtgaagcc
atcatcaccattaactgcgtcaatcggttccaacgcaaaaaatccctatggaccatcgaa
gatgaaatccgcgatcaattacacaccttattaggcattaaaaccgtcgaagtttatgat
tttggtgcaacacctatgagttcgattaaagcgccactggacgttcgtatcacatccagt
gattttgaaaacttacccgaaatggccgagaaagttgcacaagcactggcgcctataaaa
ggattaaccagtattacccaaagctgggcaagtgattttaatgaattaaaagtcgatata
gataccaataaagcactgagttatgggctaacaccggcagccattgccgaacaaataccc
atcaacggtcggatattatctatgagcggcagcttatcatcaatgtcaactcagtacgtt
cgcttgtaccttaaaggaagttttagtgaggatatccaaagtctaaaatcgatgttgatc
caaacacccgctggtgatgaattaccgctaacagcattagcgacaatcagtaataatctg
acccaggcaaaaatagaacgtgaccagatgttatacagcatcgatgttaatggattccgc
acaacccgcccggtaactcatattactagcgatgccatcgaagcactaaaaactgtgaat
acagctggttacaatgttacccagcaaggcgacattatatccttaaatgacagctttacc
cgtatgatcaaagctatcgcaacaggtatcgttattttagccatcacacttatcgtcatt
tatcgctcagttgggctcggcctaatcatgatagtggtcttgccactatccctcatcggc
gcctcatggggcatgttattgtttgacaaacccagctgtatgccaagcttaatcggtatc
ttactgctgtttgggatcatcattaaaaacgcagtattactggtcgatttctatcaagac
tttaggaaaaaagaatcgccatttgaaagtgccgttgaaagtgtccgtgtccgattccgt
ccggtaatgatgaccgcttttggcaccatagccggtatgatccctattgcactagaacaa
gccgttggcctagaacgtttatcaccactggcagatgtcgccatcggcgggcttatagta
ggtaccttactcaccctagtgtatgtaccaatgtttgcatacggattcgatagggataaa
taa
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