Streptomyces profundus: K4G22_16000
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Entry
K4G22_16000 CDS
T10233
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sprf Streptomyces profundus
Pathway
sprf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sprf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K4G22_16000 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sprf03400
]
K4G22_16000 (nth)
Enzymes [BR:
sprf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K4G22_16000 (nth)
DNA repair and recombination proteins [BR:
sprf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K4G22_16000 (nth)
Prokaryotic type
K4G22_16000 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
UED88500
LinkDB
All DBs
Position
3666507..3667262
Genome browser
AA seq
251 aa
AA seq
DB search
MVRRARRINRALGEVYYYAHPELDFDNSFELLVATVLSAQTTDLRVNQTTPKLFAAYPTP
EDLAAAEPEVLEQLIRPTGFFRNKAKSLIGLSTALRDRFDGTVPGRLEDLVTLPGVGRKT
AHVVLGNAFGRPGITVDTHFQRLVHRWQWTRAQDPVKIEAEVAEIFPRKDWTMLSHRVIF
HGRRICHARKPACGVCPIAHLCPSFGEGETDPEKARKLLKYEMGGQPGQRLKPPPDYPGR
PAPPLGAATAG
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgccgggcccgcaggatcaaccgcgcgctgggcgaggtgtactactacgcgcac
cccgagctggatttcgacaactccttcgagctgctcgtcgccacggtgctctccgcccag
acgacggacctcagggtcaaccagacgacgcccaagctgttcgccgcctacccgacgccc
gaggatctggcggcggccgagcccgaggtgctggagcagctcatccgccccacgggcttc
ttccgcaacaaggccaagtccctgatcggcctctccacggccctgcgggaccgcttcgac
ggcacggtccccggccggcttgaggatctggtgacgctcccgggcgtgggccgcaagacg
gcgcatgtggtgctgggcaatgcgttcggccgccccggcatcacggtcgacacacacttc
cagcggctggtccaccgctggcagtggacccgggcgcaggacccggtgaagatcgaggcc
gaggtggccgagatcttccccaggaaggactggacgatgctctcgcaccgcgtgatcttc
cacggccgccgcatctgccacgcccgcaagcccgcctgcggcgtctgccccatcgcgcat
ctctgcccctcgttcggcgagggcgagacggatccggagaaggcgcgcaagcttctgaag
tacgagatgggcgggcagcccggccagcggctcaagcccccgcccgactatccgggccgc
cccgcgccgccgctcggcgccgccacggccggctga
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