Scylla paramamosain (green mud crab): 135090206
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Entry
135090206 CDS
T11531
Name
(RefSeq) lactosylceramide 4-alpha-galactosyltransferase-like isoform X1
KO
K01988
lactosylceramide 4-alpha-galactosyltransferase [EC:
2.4.1.228
]
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm00601
Glycosphingolipid biosynthesis - lacto and neolacto series
sprm00603
Glycosphingolipid biosynthesis - globo and isoglobo series
sprm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
135090206
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
135090206
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sprm01003
]
135090206
Enzymes [BR:
sprm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.228 lactosylceramide 4-alpha-galactosyltransferase
135090206
Glycosyltransferases [BR:
sprm01003
]
Glycan extension
P blood group
135090206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gb3_synth
Gly_transf_sug
Motif
Other DBs
NCBI-GeneID:
135090206
NCBI-ProteinID:
XP_063842742
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All DBs
Position
34:13272886..13299497
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AA seq
436 aa
AA seq
DB search
MMPIVVSNATGGPSYLIARPISFMISCSRLVGALPLTFVFLDVVLNQRAGGVANMWSVTT
VSKAFRVLLLLMLVAGGILTFHYSYDNKYLVRLQNATLRLVSQGFTQHQGVADGSGQSLP
SWREVVCKHRQDKTHEGKKTPTLKQLFRDAIPEENRNIFLMDTACNPTPKFRVWCSVESW
ARQNPERQVWFLLTSDRIEDNTGLSSTLLHQYANLQVVTADLDDMFRDTPLLLLFNERKW
TKTWPVELLSDMLRVLVLWWWGGVYSDTDVISVRTLTLPNNSLGFEHSNSLGSAFYSFQA
RHPALYQLMRDMHKYFKPKQWGSIGPIAITRVMEKICGEKTKMLIHRAPVTCPGNVTLFP
QRTFYPMLYSQFEYYFLPGNGNKFNETFSRSFALHFWNKMSKNHWVKVNSNSVYEVAAKR
FCPTTYLFATAESDVF
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgatagtggtatccaacgccactggtggcccctcgtatctaatagcaagacca
atcagtttcatgatttcttgtagtcggttggttggtgctctgcccttaacgtttgtgttc
ctcgacgtggtgctcaaccagagagcgggaggcgtggccaacatgtggagcgtgaccacc
gtgagcaaggcgttccgagtgctgctgctgctgatgctggtggcgggcggcatcctcacc
ttccactactcctatgacaacaagtaccttgtcagactgcagaacgccacccttcgcctc
gtgtcgcaggggttcacgcagcaccaaggtgtggcagacggcagcgggcagagtttgccg
tcgtggcgagaagttgtgtgtaaacataggcaggacaaaacgcatgagggaaagaaaacc
ccgaccctgaagcagttatttagggatgcgatccctgaggagaaccgtaacattttcctg
atggacacagcgtgcaacccgacaccgaagttccgggtttggtgctccgtggaaagctgg
gcgcggcagaacccagagcgccaggtgtggtttctcctcacctcggacaggatagaggac
aacacagggctctcctccacgctgctccaccagtacgccaacctgcaggtggtgaccgct
gacctggatgacatgtttagggacacacccctcctcctcctcttcaatgaacgcaaatgg
accaagacgtggccagtggagctgttgagcgacatgctgcgggttctggtgctgtggtgg
tggggcggcgtgtacagtgacacggacgtcatcagtgtgcggaccctcacactgcccaac
aactccctgggcttcgaacattccaacagtttaggcagtgcattctatagcttccaagcc
cgccaccctgccctctatcaattgatgagagacatgcataaatactttaagcctaagcag
tggggaagcatcgggccgatcgccataacacgcgtcatggaaaaaatatgcggggaaaag
acgaaaatgttgatccatagagcgccggtgacctgcccagggaacgtcacactcttccct
cagagaaccttctatcccatgctctacagtcaatttgaatactacttcctccctggcaat
ggcaacaagttcaatgagacattcagcaggtccttcgctttgcacttctggaacaagatg
agcaagaaccactgggtgaaggtgaacagcaacagtgtgtacgaggtggcggccaagagg
ttctgtcccaccacctacttgtttgccaccgctgagtctgacgtcttctga
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