Scylla paramamosain (green mud crab): 135100668
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Entry
135100668 CDS
T11531
Name
(RefSeq) high affinity nerve growth factor receptor-like isoform X1
KO
K05101
neurotrophic tyrosine kinase, receptor type 3 [EC:
2.7.10.1
]
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
135100668
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sprm01001
]
135100668
Enzymes [BR:
sprm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
135100668
Protein kinases [BR:
sprm01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
135100668
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LRR_8
LRR_4
Ig_VEGFR-1-like_5th
I-set
Ig_3
Haspin_kinase
Ig_2
Motif
Other DBs
NCBI-GeneID:
135100668
NCBI-ProteinID:
XP_063859869
LinkDB
All DBs
Position
5:complement(22043125..22118050)
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AA seq
1156 aa
AA seq
DB search
MALSPGALCLSLVLCVCGVGCTAAEPNLTASDALPRLRHTPTPPSVPVDQLNTVNYNSSD
HEDLYSPELYSHYPAANFPMGPLHTPPFAEQGADTMGHQGDAQRQGQDNTVLYFSNVNNH
TVVSGERDAVHSKDNSLLLHAKSMNNISIPYVFNTVQSVSPVDHSGPPFSPGQRGRHSAD
QVSRHSPSDLRITLNRTHEGDVAGSDSSSVSASGSAAGGADPLDYFRFGKDNYSQIYDHS
FHAVAGVSPPRPEHRLCNVTQLSPQPSPLHGAPEDSRRSTGVGLWPLADDGQEYLDSYTV
TCDASVSLNNLTDVAEVTYKRRTINMIVRHQRKLYSVTRLDFLHFQNLVYLSITHSALTQ
IEDGAFGNLPSLQIIDLSHNQLQILSWRVFWPASVPGKTLKQINTTGNPMLPDDCRNEWL
HTWRENTRRRREVWREEEQTKGREEQDVVREMELWEQQNTIANMTIPEEGEPLNECPLEG
SNSSSCYLCPAELNATEGMKGECKIFTVECAVKGNPLPQITWRIPPHLLKLEQSKPRVSG
FSVTSVINVTYNLTHPHDVLQPLVCVAENDRSVSVEKVELGEEEPLDRSPKICSSEYKHM
SREQFCFSAQAVPPSRLTWRFYPCTSSSCTSSNSTDTRITCTVHRQDPDSSYISGCIRFP
DSLTHAKPGKYEVQITNDYGSANASQRHSRRLRLGLCTISNCSCIIDPYCKLPNVLQPLS
THAPNSSCPIIPTTARPSPPTSITRLPNSTPSSTSISPTSTSTETLPLSITLTIVVCVTV
VVLGVTLLLLRNLRAARRRQPTYVDSCPDSPFQITFIGCLCRDDECQKKSDGLQLQELMP
MSVDRLVENPEYIGNGKITLAAKKQAPVIPWDHIKFVSELGEGAFGRVYLGNLDDGWRRP
SQVAVKTLKSVGPEARQELEREVELLNNLQHKNIVSFYGVCYSSDLLLMVFEYMEHGDLN
NYLRSHNTDVALLAGEEPSMEPLSVMDCLQIALQIAAGMKYLASQHYVHRDLATRNCLVG
ASLVVKIGDFGMSRDVYTTDYYQFGGRTLLPVRWMPPESILYRRFTIESDIWSFGVVLWE
IFTGGKQPWYGYTNQEVITQITAGKILNCPDNCPPDMYRVMVACWSKNPHERLPMATLYE
RIRCLTTDEPHVLDYD
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atggcattgtctcctggagctctgtgtttatccttggtgctgtgtgtttgcggcgtcggc
tgcaccgccgccgaacccaacctgactgcgagtgacgccctcccaaggctccgccacacg
cccacgcctccctcagtgcctgtggaccaactcaacaccgtcaattataactcttccgac
catgaagatctttacagccccgagctttacagccactaccctgccgccaacttccccatg
ggtcccctgcacaccccacccttcgctgagcagggcgctgatactatggggcaccaaggt
gatgcacagcggcaaggtcaagacaacactgtactttactttagtaatgtcaataaccat
acagtggttagtggtgagcgtgatgcagtacactccaaagataatagtttgttacttcat
gcaaagtctatgaataatatttctatcccatatgttttcaacacagtacaatccgtcagc
cccgtggaccacagcgggccgcccttcagcccgggccagcgggggcgtcacagtgcagac
caggtgtccaggcactcaccctcagacttaagaattacgctaaatagaacacacgagggt
gatgtggctgggagtgatagctcctcggtgtcggcgagtggcagtgccgcaggaggcgcg
gaccctctcgattattttcgttttggaaaagacaattacagtcaaatctacgatcattcc
tttcacgcagtggccggtgtgtctcccccgagaccggagcaccggctgtgtaacgtgact
cagctttccccgcagccctccccgctacacggcgcccctgaggactcacggcgcagcacg
ggcgtgggtctctggccacttgctgatgatggccaggagtaccttgacagttacacagtg
acttgtgacgcctcggtgtccctcaacaaccttactgacgtggccgaagttacctacaag
cggcgcaccatcaatatgatcgtgaggcatcagaggaaactatactccgtgactcgcctc
gacttccttcatttccaaaacctcgtctacctgtccataacacactcggcgctcacgcag
atagaagatggtgccttcgggaacctgcccagccttcagatcatagacctcagccataac
caacttcagattctgtcctggagagtgttctggccagcctccgtccctgggaaaacactg
aagcaaatcaacactacaggcaacccgatgcttcctgacgactgtcgcaacgagtggctt
cacacatggcgggagaacaccaggaggcggcgggaggtgtggcgggaagaggagcagacc
aagggacgggaggagcaggacgtggtgagagagatggagttgtgggagcagcagaacacc
atagctaacatgacaataccagaggagggagagccgctgaacgaatgtcctctggaaggc
tccaactcgtcctcctgctatttgtgtccagctgaactcaacgccactgaaggaatgaag
ggagaatgcaagatatttactgtggagtgcgcggtgaagggcaacccactaccacagatt
acgtggcggattcctcctcacctgctgaaattggagcagagcaagccgcgtgtttctggc
tttagcgtcacctctgtcatcaacgtcacctacaacctgacgcacccacacgacgtcctc
cagcccctcgtgtgcgtcgccgagaacgacagatctgtgagcgtggagaaggtggagctg
ggggaggaggaacccttggatcggtcgcccaagatttgctcgagtgagtacaaacacatg
tcgcgggagcagttctgtttcagcgcccaggccgtgccgccctcgaggctcacgtggcgg
ttctacccgtgtacttcctccagttgcaccagcagtaactccacggacactaggatcacg
tgcacagtccaccgccaagacccagactcctcttacattagcggttgcatcaggttcccc
gactccctgacgcacgctaagccaggcaagtacgaggtgcagatcaccaatgactatggc
agcgccaacgcctcgcagcgccactcccgccgcctcagattaggcctctgcaccatcagt
aactgcagctgcatcatcgatccctattgcaaactgccgaatgtcttgcagcctctgtcc
acacacgcgcccaacagttcctgtcccatcatccccaccactgcaaggccctctccccca
acctccatcaccagactccccaattccaccccctcctccaccagcatctcccctactagc
acctccacggagactctgcctctctccatcacactgaccatcgtagtgtgtgtgactgtt
gtggtgttgggcgtcactcttctgcttctccgtaacctgcgagcggcccggagacgccag
ccgacctacgtggactcatgccctgactcacccttccagatcaccttcattgggtgcctg
tgcagggatgacgaatgccagaagaagagtgatgggctccagctgcaggagttgatgccc
atgagcgtggaccgcctcgttgagaacccggagtacattggcaacggcaagattaccctc
gccgcgaagaaacaggcgccagtcattccgtgggaccacatcaagttcgtgtctgagctg
ggcgagggagcgttcggccgcgtctatctcggaaatctggacgatgggtggcggcgaccc
tctcaggtggcggtaaagacgctgaagagtgtggggcccgaggcaaggcaggagttggag
agagaggtcgagcttctgaacaacctccagcataagaacatcgtcagcttctacggcgtg
tgctacagctccgacctgctgcttatggtcttcgagtacatggagcacggggacctcaac
aactacctcaggagccacaacactgacgtggcgctgctggcgggagaggagccgagcatg
gagccgctctccgtcatggactgccttcagatcgccctccagatagcggcaggcatgaag
tacctcgcctctcagcattacgtacacagggacctggccacgaggaactgtctggtgggg
gcaagcctggtggtcaaaatcggtgacttcgggatgtccagggatgtctacaccactgac
tactaccagttcgggggtcgcacgctgctgccggtgcgctggatgccgccagagagcatc
ctgtaccgccgcttcaccattgagtcagacatctggagcttcggtgtggtgctgtgggag
atcttcacgggcggcaagcagccctggtacggctacaccaaccaggaggtcatcacgcaa
atcacagccggcaagatcctaaactgcccagacaactgcccgcccgacatgtaccgcgtg
atggtcgcctgctggagcaagaacccgcatgagaggcttcctatggccacgctgtacgag
aggatccgttgccttaccaccgacgagccacacgtcctcgattatgactga
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