Scylla paramamosain (green mud crab): 135115050
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Entry
135115050 CDS
T11531
Name
(RefSeq) lactosylceramide 4-alpha-galactosyltransferase-like isoform X1
KO
K01988
lactosylceramide 4-alpha-galactosyltransferase [EC:
2.4.1.228
]
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm00601
Glycosphingolipid biosynthesis - lacto and neolacto series
sprm00603
Glycosphingolipid biosynthesis - globo and isoglobo series
sprm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
135115050
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
135115050
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sprm01003
]
135115050
Enzymes [BR:
sprm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.228 lactosylceramide 4-alpha-galactosyltransferase
135115050
Glycosyltransferases [BR:
sprm01003
]
Glycan extension
P blood group
135115050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gb3_synth
Gly_transf_sug
Motif
Other DBs
NCBI-GeneID:
135115050
NCBI-ProteinID:
XP_063887574
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All DBs
Position
28:complement(19182249..19193587)
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AA seq
384 aa
AA seq
DB search
MYQYTRGREHLLSLCMRNAARRSLFFLGLLLIVTVLMCAKYKKPLQENVTATSSIISPAD
DASDSTWWRRYFCRKVRYGKDAISLPVLHRDVEPSTEGTNIFMLEMSCNPRPLYRSWCGL
ESWALQNRRSGVWLVMLGTAVDSTDGLLLALKQTYPNLHVVTVDLEWLFRDLPTNNLFSS
GQWVDSTWPAKSLSNMVRLAVVWHYGGFYADFDTVCLRPTEHLRNVVGSQSAEYVNNAIF
HFDRHHPFVHQNMERQNMNFNGALLNVNGVNIMSNTAKMACNTSNFDELVAQGRGLCQGF
RVLPQSAFYPVSWENWRDIFRSGAGPNLMKELNSSFVLHAWNVFSAANPVRVGTRTLYDL
VSSAYCPITKRRVVDEARVWDSLY
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtatcagtacacgagaggcagggagcatctcctgagtttatgcatgaggaatgcggcg
cgcagatcgcttttcttcctggggttgttgttgattgtgactgtactaatgtgtgcgaaa
tataagaaaccactgcaggagaacgtgacagctacatccagcattatttctccagcagat
gatgctagtgattccacctggtggcggcgatatttttgtcgaaaagtccgttatggaaaa
gatgccatttctctgcctgttttgcatagggacgtggaaccatcaacagagggtacgaac
atctttatgcttgaaatgtcctgcaatccccgcccgctctaccgatcatggtgcggcctg
gagagctgggcactacaaaaccgccggagtggtgtgtggctggtgatgcttgggactgca
gtggactccaccgacggcttgcttctggctctaaaacaaacctatcctaatctacacgtg
gtcaccgtggacctggaatggttattcagggacctgcccacaaataacttgttttcctca
ggccagtgggttgactccacgtggccggccaagagtctcagcaacatggtgcgtttggca
gtggtgtggcattatggcggcttttacgcggacttcgacactgtctgcctgcgcccaacc
gaacacctcagaaacgtggttggcagccaaagtgcggagtatgtcaacaacgcaattttt
cacttcgaccgtcatcacccgtttgttcatcaaaatatggaacgacaaaacatgaatttt
aacggagcactgttgaacgtcaatggagtaaacataatgtccaacacagctaaaatggct
tgcaacaccagtaactttgatgagctggtggcacagggcagagggctgtgtcagggcttc
agagtgctgcctcagtctgcattctatcctgtgtcttgggagaactggagagacatattt
cgttctggcgctggcccaaatcttatgaaggagctgaatagcagttttgtcttacatgcc
tggaatgtgttcagcgctgcgaacccagtaagagttgggacaagaacactctatgatttg
gtctcatctgcctactgtcccattaccaagaggagagtagttgacgaggcaagggtgtgg
gactcgctttattaa
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