Spiroplasma sp. NBRC 100390: S100390_v1c09010
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Entry
S100390_v1c09010 CDS
T05859
Symbol
patB
Name
(GenBank) cystathione beta-lyase
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
sprn
Spiroplasma sp. NBRC 100390
Pathway
sprn00270
Cysteine and methionine metabolism
sprn00450
Selenocompound metabolism
sprn01100
Metabolic pathways
sprn01110
Biosynthesis of secondary metabolites
sprn01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
sprn00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
S100390_v1c09010 (patB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
S100390_v1c09010 (patB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sprn01007
]
S100390_v1c09010 (patB)
Enzymes [BR:
sprn01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
S100390_v1c09010 (patB)
Amino acid related enzymes [BR:
sprn01007
]
Aminotransferase (transaminase)
Class II
S100390_v1c09010 (patB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Med20
Motif
Other DBs
NCBI-ProteinID:
APE13707
UniProt:
A0A1J0U1P3
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All DBs
Position
complement(1020181..1021362)
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AA seq
393 aa
AA seq
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MKYDFDIIIDRSQNLERKWDQAYIAKNYHLTGDNIINSSIADLDFTTPSPIVDAILARAK
KGVYSYSYVSDELYQAISNWYCHQHKVVVPVDKIKLVHGTVNALHQLIQCLTDVNDYVLI
QTPVYGPFGQAIVNNNRRLLANQLQWVGDTYQIDFSMFEATIKKYQPKLFILCNPHNPGG
RVWTRTELQKIITICEQYHVLIISDEVHGDLALPNVEFHSLLSFTISDNYLIVCNSPNKA
FNLGGLKSSYLITHNKMLRTKIDEQYQRASITSPNVFTIPAYLAAYNNSEVIMWKTAMLS
YIAKNYRYVAEKLTAISGLKVMKLEASYLVWINYAETNRTSQEVNKLLLKYKLIVSKDDD
FVETPSTCFRINIGTSFAMVVKLINILITIFTK
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatgactttgatattatcattgatcgtagtcaaaatttagagcgaaaatgagac
caagcttacattgcaaaaaactatcatctaactggtgataatatcattaattcatcaatc
gctgatttagattttactacaccatcaccaattgtggacgctattttagcacgtgcaaaa
aaaggtgtttatagttatagttatgttagtgatgagctttatcaggcaattagtaattga
tattgtcatcaacacaaagtggtggttccagttgataaaattaagttagtacatgggacc
gttaatgctttgcatcaattaattcaatgtttaaccgatgttaacgattatgttttaatt
caaacgccagtttatggtccatttggacaagctattgttaacaataaccggcggcttctt
gcaaatcaattacaatgagtaggtgatacttaccaaattgatttttcaatgtttgaggca
acaattaaaaaatatcaaccaaaattatttatcttgtgtaatccacataaccccgggggg
cgtgtttgaacaaggaccgaattacaaaaaataattactatttgtgaacaatatcatgtt
ttaataatatcagatgaagtacacggcgatttggcattaccaaatgttgaatttcattcg
ttactatcatttacaatttcagataattatctaattgtttgtaattcaccaaataaagct
tttaaccttggcggtttaaaatcatcatatttaattacgcataataaaatgttaagaact
aaaattgatgaacaatatcaacgcgcttcaattacgtcacccaatgtgtttactattcca
gcttatcttgctgcctataataattcggaagtaattatgtgaaagacagcaatgttaagt
tatattgcaaagaattaccggtatgttgccgaaaaactaacggctatttcaggtttgaaa
gttatgaagttagaagcatcgtatttggtttgaattaattatgcagaaactaatcgaact
tcgcaagaagttaataaattattattaaaatacaaattgattgttagtaaagatgatgac
tttgttgaaactccatcaacatgttttagaattaatattggtacatcctttgcgatggta
gtaaaattaattaacattctaataacaatttttactaaataa
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