Sphingomonas sp. R1: OIM94_09715
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Entry
OIM94_09715 CDS
T11062
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sprr Sphingomonas sp. R1
Pathway
sprr01501
beta-Lactam resistance
sprr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OIM94_09715
01503 Cationic antimicrobial peptide (CAMP) resistance
OIM94_09715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sprr03036
]
OIM94_09715
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprr02000
]
OIM94_09715
01504 Antimicrobial resistance genes [BR:
sprr01504
]
OIM94_09715
Chromosome and associated proteins [BR:
sprr03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
OIM94_09715
Transporters [BR:
sprr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
OIM94_09715
Antimicrobial resistance genes [BR:
sprr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OIM94_09715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
UYY75817
LinkDB
All DBs
Position
1992750..1993952
Genome browser
AA seq
400 aa
AA seq
DB search
MTFLRHTAPALALVLAACGGQSQQQGAAGPGGAGGQQAAPPPVSYVVVQQQAVPLTSELP
GRLSPYESSDVRPQVNGIILERLFTEGDMVRQGQPLYRIDAAPYRAAVASARAALARSQA
AIASSEALARRYGELAKINAISKQDYENAVTSAAQARADVAAQKAALATAEIDLARTTIR
APIGGRIGRSVFTTGALVSAAQANALTTIQRLDPIYVDIQQSSADVLKLRQAIMSGKVAR
DGNAKVALKLEDGNDYGPQGTLRFADVTVDQTTGSQIIRALFPNPNGLLLPGMFVRAHLI
EGTQQNAMLVPQRAVSRDERGNPMVLVVGAENKIEPRPIQTSRTAGDNWIVTGGVKPGDK
VIVEGAMMLRPGMPVTPQPWNPNAKPAQGQPGAAAPAQGK
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgacttttctccgtcacaccgcgccggcactcgcgcttgtcctcgccgcctgtggtggc
cagtcccagcagcagggtgccgcaggccccggcggggccggtggccagcaggccgcaccg
cccccggtttcctatgtcgtcgtccagcagcaggcagtgccgctcaccagcgaactgccc
ggccggctgagcccctatgagagctcggacgtgcgcccgcaggtcaacggcatcatcctc
gaacggctgttcaccgaaggcgacatggtgcgccagggccagccgctctaccggatcgac
gccgcgccataccgcgccgccgtcgccagcgcgcgcgccgcgcttgcccgctcgcaggcc
gcgatcgcctccagcgaggcgctggcccgccgctatggcgagctggccaagatcaacgcg
atctcgaagcaggactatgagaatgcggtgaccagcgccgcccaggcccgcgccgacgtc
gcggcgcagaaggccgcgctcgccaccgccgagatcgacctcgcccgcaccaccatccgc
gcgccgatcggcggtcgcatcggtcgttcggtattcaccaccggcgcgctggtctccgcc
gcgcaggccaatgcgctgaccacgatccagcggctggacccgatctatgtcgacatccag
cagtcgagcgccgacgtgctcaagctgcgccaggcgatcatgtccggcaaggttgcccgg
gacggcaatgccaaggtcgcgctgaagctggaggacggcaacgactatggcccgcagggc
acgctgcgcttcgccgacgtgacggtggaccagacgaccggcagccagatcatccgcgcg
ctgttcccgaaccccaacggcctgctcctgccgggcatgttcgtgcgcgcgcacctgatc
gagggcacgcagcagaacgcgatgctggtgccgcagcgtgcggtgagccgcgacgagcgc
ggcaacccgatggtgctggtggtcggcgccgagaacaagatcgagccgcggccgatccag
accagccgcaccgccggcgacaactggatcgtcaccggcggcgtgaagccgggcgacaag
gtaatcgtcgagggcgcgatgatgctgcgcccgggcatgccggtcaccccgcagccctgg
aacccgaacgccaagcccgcccagggccagccgggtgccgccgctcccgcccaagggaag
taa
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