Sphingomonas sp. R1: OIM94_10630
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Entry
OIM94_10630 CDS
T11062
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
sprr Sphingomonas sp. R1
Pathway
sprr00020
Citrate cycle (TCA cycle)
sprr00785
Lipoic acid metabolism
sprr01100
Metabolic pathways
sprr01110
Biosynthesis of secondary metabolites
sprr01120
Microbial metabolism in diverse environments
sprr01200
Carbon metabolism
sprr01210
2-Oxocarboxylic acid metabolism
Module
sprr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sprr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
OIM94_10630
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
OIM94_10630
Enzymes [BR:
sprr01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
OIM94_10630
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
UYY79264
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All DBs
Position
2187142..2190072
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AA seq
976 aa
AA seq
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MGYEGLDFDDIAGGVSPGFVETLYRRYKSDPASVEPSWRAWFEGLESTASGPSWQRANWP
LTETDALTAGLDPTQMEPAPKPAKGGAPAKPAAPAASTADVTKAAEDSIRAMMLIRTYRV
RGHLAANLDPLGLARQNLPADLTPEYHGFSGADLDRPIYLGGALGLQHGTVREIVAILQA
NYCGNVGLEYMHIADVEERRFLQDRMEGKDKAITFTPDGKKAILSKVIEAEQWEKFLGKK
YVGTKRFGLDGGESMIPAMEAIIKYGGQQGVREIVYGMAHRGRLNMLANVMEKPFRVIFH
EFGGGSANPDDVAGSGDVKYHLGTSTDRQFDGISVHMSLVANPSHLEAADPVVLGKARAL
QTIRGDLEKHEQVLPVLIHGDAAFAGQGIVWETLGFSGIRGYNTGGCIHFVINNQVGFTT
SPQFARSSPYPSDVAKGVQAPILHVNGDDPEAVTFACKVAIEFRQEFHRDIVIDMWCYRR
FGHNEGDEPGFTQPLMYQKIRQHPGVSSIYSQKLIAEGVVDQAFVDEKTNQFTTLLEGEF
EAGKTYLPNKADWFAGRWSGLGAPSDGEASRRNVETGIEKKLFDSLGRTLTTVPEGHEIH
KTLGRVLDAKREMFKSGTNFDWATGEALAFGSLLSEGYTVRLSGQDSGRGTFSQRHAVWV
DQKTEAKYVPLTTVPHGSFEVLDSPLSEYGVLGFEYGYALADPKALVMWEAQFGDFVNGA
QIMIDQFIASGESKWLRANGLVMLLPHGYEGQGPEHSSARPERFLQLCAQDNMQVVNITT
PANYFHLLRRQMHRNFRKPLIQFTPKSLLRHKLAVSSAEEFLGDSHFKRILSDPKAPADT
EVKRLVLCTGKVAYDLLEARDAAGDQNTAIVRIEQLYPFPGEPLTERLKRMTNLEEVVWA
QEEPKNNGYWFFVEPLIEQCLIDAGVKPQRPRYAGRSAAASPATGLMKRHTAEQGALVAD
ALGHNVRDEIRRTRKG
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgggctatgaaggcctcgacttcgacgacatcgccggcggcgtgagccccggcttcgtc
gagaccctgtaccggcgctacaagagcgatccggcatccgtcgaaccgagctggcgtgcc
tggttcgagggtctcgaatccacggcctctggccccagctggcagcgcgccaactggccg
ctgaccgaaaccgacgcgctgacggccgggctcgaccccacccagatggagcccgcgccg
aagcccgccaagggcggcgccccggccaagcccgccgcgcctgccgcctcgacggcggac
gttaccaaggccgccgaagattcgatccgcgcgatgatgctgatccgcacctaccgggtg
cgcggccatctcgccgccaatctcgatccgctgggcctcgcccgccagaacctgcctgcc
gacctgacgccggaatatcacggtttctcgggcgccgatctcgatcgtccgatctatctc
ggcggcgcactcggcctgcagcacggcacggtgcgcgagatcgtcgcgatcctccaggcc
aattactgcggtaatgtcggcctcgaatatatgcacatcgcggacgtggaggagcgccgc
ttcctccaggaccggatggaaggcaaggacaaggcgatcaccttcacgccggacggcaag
aaggcgatcctgtccaaggtcatcgaagccgagcagtgggaaaaattcctcggcaagaaa
tatgtcggcaccaagcggttcggcctcgacggcggcgaatcgatgatcccggcgatggaa
gcgatcatcaagtacggcggccaacagggcgtccgcgagatcgtgtacggcatggcccat
cgcggccgcctcaacatgctcgccaacgtcatggaaaagccgttccgggtgatcttccat
gaattcggcggcggttcggccaatccggacgacgtcgccggttcgggcgacgtgaagtat
cacctcggcacctccaccgatcgccagttcgacggcatcagcgtccacatgtcgctggtc
gccaacccgtcgcacctcgaggcggccgatccggtcgtgctcggcaaggcgcgcgcgctg
cagacgatccgcggcgacctcgaaaagcacgagcaggtgctgccggtgctgatccacggt
gacgcggcgttcgccggccagggcatcgtgtgggagacgctcggcttctccggcatccgc
ggctacaacaccggcggctgcatccacttcgtcatcaacaaccaggtcggcttcacgacg
agcccgcagttcgcgcgctcctcgccctatccgtcggacgtcgccaagggcgtccaggcg
ccgatcctgcacgtcaacggcgacgatcccgaagccgtgaccttcgcctgcaaggtcgcg
atcgagttccgccaggaattccaccgcgacatcgtgatcgacatgtggtgctatcgccgc
ttcggccacaatgaaggcgacgagcccggcttcacccagccgctgatgtaccagaagatc
cgccagcaccccggtgtgagcagcatctacagccagaagctgatcgccgagggcgtggtc
gaccaggcatttgtcgacgagaagaccaaccagttcaccacgctgctcgaaggcgagttc
gaggcgggcaagacctatctgccgaacaaggcggactggttcgccggccgctggtcgggc
ctgggcgcgccgtccgacggcgaggcctcgcgccgcaacgtcgagaccggcatcgagaag
aagctgttcgacagcctcggccgcacgctgaccacggttcctgaggggcacgagatccac
aagactctcggccgcgtgctcgatgccaagcgcgagatgttcaagtcgggcacgaacttc
gactgggcgaccggcgaagcgctggccttcggctcgctgctctcggaaggctataccgtc
cgcctgtccggccaggattcgggccgcggcaccttctcgcagcgccacgccgtctgggtc
gaccagaagaccgaggccaagtatgtgccgctcaccacggtgccgcatggcagcttcgag
gtgctcgattcaccgctcagcgaatatggcgtgctcggcttcgagtacggctatgcgctg
gcggatccgaaggcgctggtgatgtgggaagcgcagttcggcgacttcgtgaacggcgcg
cagatcatgatcgaccagttcatcgcgtcgggcgagtccaagtggctccgcgccaacggc
ctggtgatgctgctgccgcacggctatgaaggccagggccccgagcacagctcggcgcgt
ccggagcgcttccttcagctctgcgcgcaggacaacatgcaggtggtgaacatcaccacg
ccggccaactatttccacctgctgcgccggcagatgcaccgcaacttccgcaagccgctg
atccagttcacgcccaagtcgctgctccgccacaagctggcggtctccagcgccgaggag
ttcctgggcgacagccacttcaagcggatcctgtcggaccccaaggcaccggcggatacc
gaggtgaagcgcctcgtgctctgcaccggcaaggtcgcctatgacctgctggaagcgcgc
gatgcagccggcgaccagaacaccgcaatcgtccggatcgagcagctctacccgttcccg
ggcgagccgctgaccgagcggctgaagcgcatgaccaacctcgaagaggtggtctgggcc
caggaagagccgaagaacaacggctactggttcttcgtcgagccgctgatcgagcagtgc
ctcatcgatgccggcgtcaagccgcagcgtccgcgctatgcgggccgctcggcagcggcc
tcgcccgccaccggcctgatgaagcgccacaccgcagagcagggcgcgctcgttgccgac
gcgctcggccataatgtccgcgatgaaatccgccgcacccggaaaggttga
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