Sphingomonas sp. R1: OIM94_13160
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Entry
OIM94_13160 CDS
T11062
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sprr Sphingomonas sp. R1
Pathway
sprr01501
beta-Lactam resistance
sprr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OIM94_13160
01503 Cationic antimicrobial peptide (CAMP) resistance
OIM94_13160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sprr03036
]
OIM94_13160
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprr02000
]
OIM94_13160
01504 Antimicrobial resistance genes [BR:
sprr01504
]
OIM94_13160
Chromosome and associated proteins [BR:
sprr03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
OIM94_13160
Transporters [BR:
sprr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
OIM94_13160
Antimicrobial resistance genes [BR:
sprr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OIM94_13160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
RND-MFP_C
BSH_CzcB
Beta-barrel_RND_2
HH_MFP_RND
BSH_CusB
BSH_RND
HH_YBHG
CzcB_C
HH_EMRA
Biotin_lipoyl
BSH_Fcp1
Neopullulanase-like_C
BSH_YknX
Motif
Other DBs
NCBI-ProteinID:
UYY76464
LinkDB
All DBs
Position
2749213..2750391
Genome browser
AA seq
392 aa
AA seq
DB search
MNYEAGMLDRQERLGYEGEPARRGRRWLWIGLGAFALIVIAAFLVMKRPAAQLPAAKGGK
QQAQMQTVTVSAPGQQTISTIVTGTGSLAAKREMPVGVAGEGGIVTRVLVDAGSWVQKGQ
VLAVIDRSVQTQTAESLAAQIRVAEADAKLAQANLERAQQLVGNGFISRADIDQRTANRD
QALARVRVAKAQLAETQARNRRLDIRAPEAGLVLARQIEPGQIVSSGSGALFRMAMDGQL
ELRTQLAEADVQKLHVGAPAEVTPVGTQLSFKGQVWQVSPVIDPTSRLGVARIALAYNPA
LRPGGFASARIVAGAVTTVVLPQSAVQSDQQGSFVFILNEKNEAVRRDVKTGDVSDQGVR
ITSGLTGSERVVLTAGAFLNPGQKVIPQLSKK
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaactacgaggcagggatgttggatcggcaggagcggctcggctacgaaggtgagccg
gcgcggcgggggcggcgctggttgtggatcggcctgggcgcgtttgcgctgatcgtgatc
gccgcgttcctggtgatgaagcgccctgccgcgcagctgcccgccgccaaggggggcaag
cagcaggcgcagatgcagacggtgaccgtctccgcgccggggcagcagaccatctccacc
atcgtcaccggtaccggcagcctggcggccaagcgcgagatgcccgtcggcgtcgcgggc
gaaggtggcatcgtcacgcgcgtgctggtcgacgccggcagctgggtgcagaagggccag
gtgctcgccgtcatcgaccgatcggtgcagacgcagaccgccgaatcgcttgccgcgcag
atccgcgttgcggaggccgatgccaagctggcgcaggccaacctggaacgcgcccagcag
ctggtcggcaacggcttcatctcgcgtgccgatatcgaccagcgcaccgccaatcgcgac
caggcgctcgcccgggttcgcgtcgccaaggcgcagctcgccgaaacccaggcgcgcaat
cgccggctggacatccgtgcaccggaagcgggcctcgtgctggcgcgtcagatcgagccc
ggccagatcgtcagttcgggctcgggcgcgctgttccgcatggcgatggatgggcagctc
gaactgcgtacccagcttgccgaggccgatgtccagaagctgcacgtcggcgcgccagcc
gaagtgacgccggtcggcacccagctgagcttcaagggccaggtgtggcaggtgtcgccg
gtgatcgacccgacgagccgcctcggcgtcgcccgcatcgcgctcgcctataatcccgcg
ctgcgccccggtggctttgccagcgcgcgcatcgtcgcaggcgcggtcaccacggtcgtc
cttccgcaatcggcggtgcagagcgaccagcagggcagcttcgtcttcattctcaacgag
aagaacgaggcggtgcgccgcgacgtgaagaccggcgacgtgtccgaccagggcgtgcgg
atcaccagcgggctgaccggcagtgagcgcgtcgtcctcaccgcgggtgcgttcctcaac
ccgggccagaaggtcattccgcagctttcgaagaagtaa
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