Sphingomonas sp. R1: OIM94_13885
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Entry
OIM94_13885 CDS
T11062
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sprr Sphingomonas sp. R1
Pathway
sprr01501
beta-Lactam resistance
sprr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OIM94_13885
01503 Cationic antimicrobial peptide (CAMP) resistance
OIM94_13885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sprr03036
]
OIM94_13885
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprr02000
]
OIM94_13885
01504 Antimicrobial resistance genes [BR:
sprr01504
]
OIM94_13885
Chromosome and associated proteins [BR:
sprr03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
OIM94_13885
Transporters [BR:
sprr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
OIM94_13885
Antimicrobial resistance genes [BR:
sprr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OIM94_13885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
RND-MFP_C
HH_MFP_RND
Beta-barrel_RND_2
YknX_C
HH_EMRA
BSH_CusB
HH_YBHG
HH_CzcB
CzcB_C
BSH_CzcB
HgmA_N
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
UYY76597
LinkDB
All DBs
Position
complement(2903825..2905057)
Genome browser
AA seq
410 aa
AA seq
DB search
MNAPTSYRRSGLIVFASALLLASCSAGDSGSKQGGRKGAAGPPQVGYVVVQPSSVPMTTE
LAGRVTAYQSSEVRPQVAGIIQRRFFTEGAIVRQGQTLYQIDPSLYQAAVAQAQANLQNA
QANLEAARIKADRYKPLAAMQAVSQQDYTDALAAARQAAAQVAQQRAALQTAQINLRFTR
VPAPISGRIGRSLFTEGALVTTNQTDPLATIQRLDPIFVDIQQSSADMLALRKALAQNGV
TPASAAVRLKLEDGSDYDLAGAVEFAEVVVNASTGTVTLRARFPNPQGVLLPGMFVRAMF
AQAIDTQAYLVPQAGVSRDPKGNATVYVVGAGNKAEARTVVADRTIGQNWVVTQGLAPGD
KVIVQGTANLKPDIDIKPVPANAPQKIEPPKKGQGQGGAQTKGGSQAKAG
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgcaccgaccagctatcgccgttcgggcctgatcgtctttgcatcggccctgctc
ctcgcctcgtgcagcgctggcgacagcggcagcaagcagggcgggcgcaagggtgccgcc
gggccgccccaggtcggctatgtggtggtgcagccgagcagcgtaccgatgacgaccgag
cttgccggccgcgtcaccgcctatcagtcttcggaggtgcggccgcaggtggccggcatc
atccagcgccgcttcttcaccgagggcgcgatcgtccgccaggggcagacgctgtaccag
atcgaccccagcctctatcaggccgccgtcgcgcaggcccaggccaatctgcagaacgcg
caggccaatctcgaggctgcgcgcatcaaggccgatcgctacaagccgctcgccgcgatg
caggcggtgagccagcaggattataccgacgcgcttgccgccgcgcgccaggctgccgcg
caggtagcgcagcagcgcgcggcgctgcagaccgcgcagatcaacctgcgcttcacccgg
gtgcccgcgccgatcagcggccgcatcggccgcagcctcttcaccgaaggcgcgctggtg
accaccaaccagaccgatccgctcgccacgatccagcggctcgatccgatcttcgtggat
atccagcagtcgagcgccgacatgctggcgctgcgcaaggcgctcgcccagaacggggtg
acgccggcgagcgcggcggtccggctgaagctggaggacggcagcgactatgatctcgcc
ggcgcggtggaattcgccgaagtggtggtcaacgccagcaccggtaccgtcaccttgcgc
gcgcgcttccccaatccgcagggcgtgctgctgccgggcatgttcgtccgggcgatgttc
gcacaggcgatcgacacccaggcctatctggtgccgcaggccggtgtgtcccgcgatccc
aagggcaatgccaccgtctatgtggtgggcgcgggcaacaaggccgaggcccgcaccgtg
gtcgccgatcgcacgatcggccagaactgggtggtcacgcaggggctcgcccccggcgac
aaggtgatcgtgcagggcacggcgaacctcaagccggacatcgacatcaagccggtgccc
gccaacgcgccgcagaagatcgaaccgcccaaaaagggccaggggcaaggcggcgcccag
accaagggcggcagccaggccaaggcgggctga
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