Sphingobium sp. RSMS: EGM87_01375
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Entry
EGM87_01375 CDS
T10811
Symbol
odhB
Name
(GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase
KO
K00658
2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:
2.3.1.61
]
Organism
sprs Sphingobium sp. RSMS
Pathway
sprs00020
Citrate cycle (TCA cycle)
sprs00310
Lysine degradation
sprs00380
Tryptophan metabolism
sprs00785
Lipoic acid metabolism
sprs01100
Metabolic pathways
sprs01110
Biosynthesis of secondary metabolites
sprs01120
Microbial metabolism in diverse environments
sprs01200
Carbon metabolism
sprs01210
2-Oxocarboxylic acid metabolism
Module
sprs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sprs_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sprs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
EGM87_01375 (odhB)
09105 Amino acid metabolism
00310 Lysine degradation
EGM87_01375 (odhB)
00380 Tryptophan metabolism
EGM87_01375 (odhB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
EGM87_01375 (odhB)
Enzymes [BR:
sprs01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
EGM87_01375 (odhB)
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Motif
Pfam:
2-oxoacid_dh
Biotin_lipoyl
E3_binding
BSH_YhbJ
BSH_CusB
BSH_YknX
GCV_H
BSH_RND
SAPS
MamY_C
Motif
Other DBs
NCBI-ProteinID:
UXC91169
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Position
1:300507..301748
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AA seq
413 aa
AA seq
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MATEVKVPTLGESVTEATVGQWLKKPGDAVKADEPIVSLETDKVAVDVPAPAAGTLGDIV
AKEGDTVEVGALLAYVNEGAAAAAAPAAAPAPAAKAEAATPAPAASAPADEDEGGNLTLS
PAVRRLVLEHGLDPSKIKGTGKDGRLTKDDVVAAAAAGTAKAAAAAPAAAPAAAAPAAGP
SRAQERVKMTRLRQTVAKRLKEAQNNAALLTTYNDVDMTNVIEARAKYKDLFEKKHGVRL
GFMGFFTKAVCMALRDIPGVNAQIEGDEIVYNDFADISVAVSAPNGLVVPVIRNAESLSV
AEIEKTIGSFGKKAKEGTLTMEDMKGGTFTISNGGVFGSLLSSPIINPPQSAVLGLHRIE
DRPVVRDGQIVIRPMMYLALSYDHRLIDGREAVTFLVAVKNAIEDPTRLLIDL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgaagtcaaagtccccactttgggtgaatccgttaccgaagcaaccgtcggc
cagtggctcaagaagcccggcgacgccgtgaaggccgacgagcctatcgtcagtcttgaa
accgacaaggtcgcggtcgacgtgcccgcgccggccgccggcacgctgggcgacatcgtc
gccaaggaaggcgatacggtcgaggtcggcgcgctgctggcctatgtcaacgagggcgcg
gccgctgcggcagcgcctgccgctgctccggcccccgccgccaaggcggaagccgccacg
ccggccccggccgcttcggcccccgccgatgaggatgagggcggcaacctgaccctgtcg
cccgccgtgcgccgtctggtgctggaacatggccttgatccgagcaagatcaagggcacg
ggcaaggacggtcgcctgaccaaggacgacgtcgtggccgccgccgccgccggtaccgcc
aaggccgccgctgctgcgcctgccgccgcgcccgccgctgctgcgcctgccgctggcccc
agccgcgcgcaggaacgcgtcaagatgacccgcctgcgccagaccgtcgccaagcggctc
aaggaagcgcagaacaacgccgcgctgctgaccacctataacgacgtcgacatgaccaac
gtcatcgaggcgcgcgccaagtacaaggacctgttcgagaagaagcatggcgtccgcctg
ggcttcatgggcttcttcaccaaggctgtctgcatggcgctgcgcgatattccgggcgtc
aacgcgcagatcgagggcgacgagatcgtctataacgacttcgctgacatctcggtcgcc
gtgtcggccccgaacggactggtcgtgccggtgatccgcaatgccgagagcctgagtgtg
gccgagatcgagaagacgatcggcagcttcggcaagaaggccaaggaaggcacgctgacc
atggaggacatgaagggcggcaccttcaccatctccaatggcggcgtgttcggttcgctg
ctgtcgagcccgatcatcaacccgccgcagtcagcggtgctgggcctccaccgcatcgag
gatcgcccggtcgtccgcgacggccagatcgtcatccgcccgatgatgtatctggcgctc
agctatgaccatcgcctgatcgacggtcgcgaggcagtgaccttcctcgtcgcggtgaag
aacgcgatcgaggacccgacccgcctgctgatcgacctgtaa
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