KEGG   Sphingobium sp. RSMS: EGM87_23920
Entry
EGM87_23920       CDS       T10811                                 
Name
(GenBank) type IV secretory system conjugative DNA transfer family protein
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
sprs  Sphingobium sp. RSMS
Pathway
sprs03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sprs00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    EGM87_23920
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sprs02044]
    EGM87_23920
Enzymes [BR:sprs01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     EGM87_23920
Secretion system [BR:sprs02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   EGM87_23920
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind
Other DBs
NCBI-ProteinID: UXC93755
LinkDB
Position
pRSMS1:133905..135866
AA seq 653 aa
MLAQRSPWAIGLCVIGAILLWAVITLFVALFGLGQIGPNIDLGTLPAWLWYYRGDPLLGD
WIKRGAMAGAAVIALLVLTILRRGPSLHGRARFAREGEIRREGLRAPSGIVVGRKAGRFL
IFGGNEHVLLEAPTRAGKGVGVVIPNLLTWPDSVVVLDVKRENWSTSAGYRQRAGQSVYL
FDPLDPEGRTARYNPLAHIRRADDTEVVNELQKIAVMLFPAPERSDPFWAEAARAAFIGV
GALVAANPGMPFTIGEIYRRLTTGDPKSDLPKALEEARGAGQRLSQACVSAIQDFASASD
NTFSGIKQTITARLNLWLNPVVDAATSASDFNLREVRARRMSIYLGVSPDNIDRIAPVYS
LFLQQLVDLNTRDLPDAASNVPVLILLDEFARLGKASVIAGGFSYVAGYGLRLLPVIQSR
AQLRAIYGPDVTDEIIANCGLEVVFTPKELKVANELSERLGFFTMNVKSRSRTIHGLLAN
RSISESDQRRALLLPQELMQMPKTELLLLRGGIAPVRGRKIAFYRMPRFTRRVLAPPILP
SRPIPAAQPPTVLPPGKHQVVSPYNDAEKSTAKSTGGALLEETKMREMTDGELAGAAKIT
DDMLVLGNLTDLPPPGDEAAAIAFVSSMIERALVQTEGASSSPLIQERTDHGR
NT seq 1962 nt   +upstreamnt  +downstreamnt
atgctggcgcagcgtagtccctgggcgattggcctgtgcgtgatcggcgcaattctgttg
tgggctgtcattaccctgttcgttgccttgttcggactcgggcagatcggacctaatatc
gatctcggcactctgccggcctggctctggtattatcgtggtgatccactgctcggggat
tggatcaagcggggtgcgatggccggcgccgccgtaatcgcgcttcttgtcctcacgatc
ctgcggcgaggcccatccttgcacggcagggctcggtttgcacgcgagggcgaaatccga
cgcgaggggctgcgtgccccgtctggcattgtcgttggacgcaaagcagggcgtttcctc
attttcggcggaaacgagcatgtcctgctcgaagcgccgacgcgcgccgggaagggcgtc
ggtgttgtcatccccaatctgctgacctggccggattcggtcgtcgtgctcgatgtgaag
cgggagaattggagtaccagcgccggttatcgccaacgtgccggtcaatcggtttacctc
ttcgatccgttggaccctgaagggcggacggcacggtacaatcccctggcgcatatccgg
cgagccgatgacaccgaagtcgtcaacgagcttcagaaaatcgcagtcatgctcttcccc
gcgccggaacgatcggacccgttttgggccgaagcggcgcgggcggccttcatcggcgtc
ggcgcgctcgttgctgccaatcctggcatgcccttcacgatcggcgagatctatcgacgg
ctgaccactggggatcccaagagcgatcttcccaaggccctggaagaggcgaggggggca
ggacagcgcctaagtcaggcatgcgtctcggcaatccaggatttcgcctcggcttcggac
aacaccttttccgggatcaagcagacgatcacggcgcggctcaatctctggctcaacccc
gtggtcgatgccgcgacctcggcaagcgatttcaacctgcgcgaagtccgggcgcggcgc
atgtcgatctatctcggtgtctcgcccgacaatatcgaccggatcgcgccggtttacagc
ctcttcctgcagcagctggtggatctcaacacgcgcgatttgcccgacgctgccagcaat
gtcccagtcctgatcctgctcgatgaattcgcaaggctggggaaggcctcggtcatcgcg
ggcggcttttcctatgtcgctggatacggcttgcgcctgctgccggtgatccagagccgg
gcgcagctgcgggccatttatggtcccgatgttaccgacgaaatcatcgccaattgcggg
cttgaggtggtgttcacgcccaaggagctgaaggtcgcgaacgagctttcagagcggctc
ggcttcttcacgatgaatgtaaaatcgcgcagccgaacgattcatgggctgttggccaat
cgcagcatatcggaatccgatcagcgccgcgccctcctgctgccgcaggagctgatgcag
atgcccaagaccgagctcttgttgctgcgcggcgggatcgcgccggttcgtggtaggaag
atcgccttttatcgaatgccgcgcttcacaaggcgcgtgttggcgccgcccattctgccg
tcgcggcctatccccgctgctcagcccccaactgttctgccgccaggcaagcatcaggtg
gtgtccccttacaatgacgcggagaaatcaacggcgaagagcacgggcggggccttgctg
gaagagaccaagatgcgggaaatgaccgatggtgaactggcgggcgcggctaagattacc
gatgatatgttggtcctgggcaacctgaccgacttgccgccgcccggcgatgaggcagcg
gccatcgcttttgtgtcatcgatgatcgagcgggcgctcgtgcagacggaaggggcgtca
tcttcacccctcatccaggaaaggacagatcatggccgctga

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