Sphingobacterium sp. R2: VXM68_01080
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Entry
VXM68_01080 CDS
T10631
Symbol
odhB
Name
(GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase
KO
K00658
2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:
2.3.1.61
]
Organism
sprz Sphingobacterium sp. R2
Pathway
sprz00020
Citrate cycle (TCA cycle)
sprz00310
Lysine degradation
sprz00380
Tryptophan metabolism
sprz00785
Lipoic acid metabolism
sprz01100
Metabolic pathways
sprz01110
Biosynthesis of secondary metabolites
sprz01120
Microbial metabolism in diverse environments
sprz01200
Carbon metabolism
sprz01210
2-Oxocarboxylic acid metabolism
Module
sprz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sprz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VXM68_01080 (odhB)
09105 Amino acid metabolism
00310 Lysine degradation
VXM68_01080 (odhB)
00380 Tryptophan metabolism
VXM68_01080 (odhB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
VXM68_01080 (odhB)
Enzymes [BR:
sprz01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
VXM68_01080 (odhB)
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Motif
Pfam:
2-oxoacid_dh
Biotin_lipoyl
E3_binding
BSH_RND_rel
BSH_YhbJ
GCV_H
Motif
Other DBs
NCBI-ProteinID:
XCY05564
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Position
243066..244301
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AA seq
411 aa
AA seq
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MSLEIKVPTVGESITEVTLSQWLKQDGDYVEMDENIAELESDKATFELPAEKAGILRIIA
QEGDTLEIGAVVCTIEEGDAPTGDSAPAAAPAKEASSTAAPAAAAKDEDPDSYAAGTASP
AAAKILREKGIDASTIKGTGKEGRITKEDAEKAQPVAKAAAPAAKPAAAAAPAAPVAGSR
NERREKLSSLRKTIAKRLVAVKNETAMLTTFNEVNMQPIMDLRAKYKDTFKEKFGIGLGF
MSFFTKAVTTALAEWPAVNARIEDNEIVYSDFADVSIAVSAPKGLVVPVIRNADAMSLEQ
IEKAIAALAGKARDNKLTIDEMTGGTFTITNGGVFGSMMSTPIINAPQSAILGMHNIIQR
PIAENGQVVIRPMMYIALSYDHRIIDGRESVSFLVRVKQLLEDPARLLLGV
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgagcttagaaattaaagtaccaaccgtaggtgaatcaatcacggaggtaaccttatca
caatggttgaaacaagatggcgattatgtggagatggatgaaaacatcgccgaactggaa
tcagacaaagcaacgtttgaattaccagctgaaaaagcgggtatcttaagaatcattgca
caagaaggtgatactttagaaatcggtgctgttgtttgtacaattgaagagggtgatgcc
cctacaggcgattcagctccagctgctgcccctgctaaggaagcatcatcaactgctgct
ccagcggctgccgcgaaagacgaagatccagatagctatgctgctggtacagcttctcct
gctgctgcaaaaatcttaagagaaaaaggaattgatgcttctacaataaaaggaacaggg
aaagaaggccgtatcactaaagaagatgccgaaaaagctcaacctgttgctaaagctgcg
gcacctgcggcaaaacctgctgctgctgctgcaccagctgccccagtcgctggttctaga
aatgaacgtcgtgagaaattatcttccttacgtaaaacgatcgcaaaacgtttagtcgcg
gttaaaaatgaaacagcgatgttgacaacattcaatgaagtcaatatgcagccgatcatg
gatttacgcgccaaatataaagatacttttaaagagaaatttggtattggtcttggcttc
atgtcattctttactaaagcagtaaccactgcgttagctgaatggcctgctgtcaatgca
cgtatcgaagataacgagattgtatattctgatttcgcagatgtttcaatcgcggtttct
gcccctaaaggattggtagttccagttattcgtaatgcagatgccatgtcattggagcag
atcgaaaaagcaattgctgctttagcgggtaaggcacgtgacaacaaattaacgatcgat
gaaatgaccggtggtacatttacaattaccaacggcggtgtattcggatcaatgatgtct
acgccgatcatcaacgcgccacaatcggcaatcttgggtatgcacaacatcatccaacgt
cctattgctgaaaatggtcaggtggtgatccgtccaatgatgtatattgcactttcttat
gatcaccgcatcatcgatggtcgtgaatcagttagcttcttggttcgtgtaaaacaatta
ttggaagatccagctcgtttattgttgggtgtttaa
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