Sphingobacterium sp. R2: VXM68_17790
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Entry
VXM68_17790 CDS
T10631
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
sprz Sphingobacterium sp. R2
Pathway
sprz01501
beta-Lactam resistance
sprz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VXM68_17790
01503 Cationic antimicrobial peptide (CAMP) resistance
VXM68_17790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprz02000
]
VXM68_17790
01504 Antimicrobial resistance genes [BR:
sprz01504
]
VXM68_17790
Transporters [BR:
sprz02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
VXM68_17790
Antimicrobial resistance genes [BR:
sprz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VXM68_17790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
XCY04493
LinkDB
All DBs
Position
complement(4290961..4294143)
Genome browser
AA seq
1060 aa
AA seq
DB search
MKITEISIKRPSIIIVLFIILTLGGLFSYTQLGYELVPKFEINVITVQTIYPGASPAEVE
SSVTKKIEDAISSLESIKKVESTSLEGVSIVMVTLNNGADVNFLLTDAQRKINAVVNDLP
DDVKTPSLSKFSFDDVAIMSLAVTSNLSEKELYDLLDNKIQPVFARINGVAKVDMIGGEE
REIQISVDPKKIEGYGLTISQVQQTIASSNLDFPTGNVSTRDNRTTIRLAGKVTSIEELR
NLPITTPAGVQIYLRDIADVQDGIKEIEKVARLDRQNTILLQVFKQSDANAVAVSEAVKK
VIAVRDKDGKVISGVEKDYAAQNIKILVANDSSDFTLNAADNVIHDLMIAIALVGFIMLF
FLQSLRNAAITMVAIPLSLIATFIGLLLMGYTLNLMSLLGLSLVVGILVDDAIVVIENIH
RHMEMGKNKVRAAYDGASEIGFTVTAITLVIVVVFLPIAMSTGLVANILAQFCVTVIIST
LLSLLVSFTVVPWLYSRFGKLEHLSKKSLFGRVIHGFESGLNSFTHWVAGLLTWSLKNVK
TKLATLGLAIGLLIASFALVVKGYIGSDFFPSVDRKEFFIQLELDKDASLEKTNLLTQKA
EAYITAKPDVKEIITTVGQSSDGMASTTGSRYKSEIHVILDKENFEGNSQVYSATLKREL
ENKLIGAKIKTVNVGIMGAEQAPLKLTIIGASVEDAQEFAEKAADLLRKIPGSAGVKLTS
EAGNPEINVKIDRDKMTSLGLNVSTVGMTMQTAFSGNTDNKYRAGDNEYDINIRYNESGR
ATIDNVRALKFINNNGASISLDQFAEVTYGSGPTLLERRDKSPAVSIQGQVIGRPMGTVA
QEWQAQFEKLPRKPGIVFVWGGNMENQTEGFGTLGIALLASIILVYLVMVALYDSFITPF
VVLFSIPLSFIGALLFLALGNQTLNIFTILGIIMLIGLVAKNAIMLVDFANHRKEAGDNT
HDALVAANHARLRPILMTTIAMVFGMIPIAIATGDGADMNRGLAIVIIGGLLSSLFLTLV
VVPVVYSIFDSLQRRFGKKEKTDYEALIKEDYDHVDVAEH
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaccgaaatatcgataaaacgccccagtatcattatcgtattatttataata
ctgacattgggtgggttgttttcttatacgcaattgggctacgaactggtccctaagttt
gaaattaacgtaatcacggtacaaacaatctatccgggggcatcgcctgcggaagtggaa
agttcggtcaccaagaagatagaagatgcaatctcttcgttggaaagtatcaaaaaggtg
gagtcgacctcgctcgaaggggtttcgattgtgatggttaccctgaataacggtgcagat
gtcaacttcctcctgacagatgcccagcgaaaaatcaacgctgtcgtcaacgatttgccg
gacgatgtgaagacgccttcgctctccaaattctcatttgatgacgtggcaatcatgagt
ctggccgttacatccaacttgtcagagaaagagctttacgacttattggacaataaaatc
caaccggtctttgcccgtatcaacggggttgccaaggtggacatgatcggtggggaggaa
cgcgaaatacagatttctgtagatcccaaaaaaattgaaggttatggactcacaatttcg
caggtgcaacaaacgattgcatcgtccaacctggattttcctacaggtaacgtcagtacc
cgcgacaaccgtacaacgattcgtcttgcaggtaaagtaacctctatcgaagaattgcgc
aatctgcctatcactacgcctgcaggcgtgcagatctatctgcgcgatatcgccgatgta
caggatggtatcaaagagattgaaaaggtggcacgtttggaccgccaaaacacgattttg
ctacaggtatttaaacagtctgacgcgaatgccgtggctgtgtctgaggccgtaaagaaa
gtgatcgctgtgcgtgataaagatggaaaggtgattagtggggtagagaaagattatgcg
gcacagaatattaaaattctggtggccaatgactcttctgattttaccttgaatgcggct
gataacgttatccacgatttgatgatcgccattgctttggtgggttttatcatgcttttc
ttcctgcaaagtttgcgtaatgctgccattaccatggtagcgatcccgctctccttgatt
gcaacttttatcggtttgctactgatggggtataccttaaacctcatgtccttactggga
ttgtcactggtggtaggtatcttggtggatgatgcgatcgtagtgatcgaaaacattcac
cgccatatggagatggggaaaaataaagtacgcgcagcgtatgatggggcgtctgaaatt
ggatttacggtaacggcaatcaccttggtcattgtcgtcgtgttccttccaatcgccatg
tcaacgggattggtggccaatatccttgcacagttctgtgtgactgtcatcatctcgacg
ctattgtccttattggtatcctttacggtcgtaccgtggttgtattcacgcttcggtaaa
ttggagcatctaagcaagaagtcgctgtttggtcgtgttatccatggttttgaaagtggt
ctgaacagctttacacattgggttgccggtttgttaacctggtcattaaaaaatgtcaaa
accaaattggcgactttaggtttagcgatcggtttacttattgcatcattcgcactcgtg
gtaaaaggttatatcggttccgatttctttccgagtgtagaccggaaagaattttttatc
cagctggaactcgataaggatgcttctttggaaaagacgaacttgttaacacagaaagcg
gaggcctatattacggcgaagccagatgtcaaggaaatcattacgacagttggtcagtcc
tcagacggaatggcgtcgacaacaggctcgcgttataaatcggagatccatgtgattctc
gacaaagaaaattttgaaggcaactcacaggtgtattcagcgactttaaaacgcgaactg
gaaaataagctgatcggtgccaagatcaaaacggtaaacgtaggtatcatgggagcggaa
caagcaccattgaaattgaccattattggtgcctcggttgaagatgcccaggaatttgct
gagaaagcagcagatctattgcgtaaaattccaggatctgcgggggttaagttgacttcc
gaagcgggtaatccggagatcaatgtgaagatagaccgcgataaaatgacttcgttggga
ttgaacgtatctaccgtaggtatgaccatgcagacagcattctccggtaatacggataat
aaatatagagcaggggacaacgagtacgacatcaacatacgctataacgaaagtggtcgt
gcaacaatcgacaatgtgcgagcccttaaatttatcaacaataatggtgcttccatttca
ttggatcaatttgctgaagtgacgtatggctctggacctactttgttagaacgacgcgac
aagtcgccagccgtatctattcaggggcaggttatcggtagaccgatgggtactgtcgct
caagagtggcaggcgcagtttgagaaattgccgcgtaaaccgggaattgtatttgtatgg
ggtggtaatatggaaaatcaaactgaaggtttcggtacattgggaattgctttgttagca
tccatcatactagtataccttgttatggtcgcactgtacgacagttttatcacgccgttt
gtcgtgttattctcgatcccattgtcgtttattggtgcattgttgttcctggcattggga
aatcagaccttgaacatctttactattttgggtattatcatgttgattggtctagttgct
aaaaatgcgatcatgctcgtcgattttgccaatcaccgtaaggaagccggcgataatact
catgacgctttagtggctgccaaccatgcgcgtcttcgtccgatcctgatgacgacaatt
gcgatggttttcggtatgatccctattgcaatcgctacaggcgatggtgcagatatgaac
agagggctcgctattgtcatcatcggtggtctattgtcctccctattcttgacgttagtt
gtagtacccgtggtgtactccatttttgatagtcttcaacgtcgttttggaaagaaagag
aagactgactatgaagccttgataaaggaagattatgaccatgtggacgtggcagaacat
taa
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