Sphingobacterium sp. R2: VXM68_17795
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Entry
VXM68_17795 CDS
T10631
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sprz Sphingobacterium sp. R2
Pathway
sprz01501
beta-Lactam resistance
sprz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VXM68_17795
01503 Cationic antimicrobial peptide (CAMP) resistance
VXM68_17795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sprz03036
]
VXM68_17795
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprz02000
]
VXM68_17795
01504 Antimicrobial resistance genes [BR:
sprz01504
]
VXM68_17795
Chromosome and associated proteins [BR:
sprz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
VXM68_17795
Transporters [BR:
sprz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
VXM68_17795
Antimicrobial resistance genes [BR:
sprz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VXM68_17795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
Beta-barrel_RND_2
BSH_CzcB
Biotin_lipoyl
BSH_RND
Beta-barrel_YknX
RND-MFP_C
BSH_CusB
HH_EMRA
CzcB_C
BSH_RND_rel
BSH_YknX
HH_YBHG
HH_MFP_RND
BSH_YhbJ
QRPTase_N
DUF2118
SpaA
DUF3954
RnfC_N
MJ0548_C
Motif
Other DBs
NCBI-ProteinID:
XCY04494
LinkDB
All DBs
Position
complement(4294210..4295265)
Genome browser
AA seq
351 aa
AA seq
DB search
MKRGIITLLIIAAGLAGIFFVLNKNKKKNEAETAEVAKKNAAIAVRIDTAKVSSMDLRYT
ANGTFSPKQEVTVSAQTAGRVVRVLVDEGSRVSAGQTLAIIEGDKLNVNVANAQAAYTNA
QADLQRFESAYSTGGVTKQQLDQVKLQFENAKNNLQASKLNAGDVTIKTSVSGIVNARKI
EPGTYLNIGAPAFDIVNVATLKLRVNVDEKNVATLKIGQSVDVSASVYADERFTGKITFI
APKSDGSLNFPVEIEVNNASNKLRAGMYGTAIFGEGVATNTLIVPRNAFVGSVSDNKIFV
LKNGKAIETTVKSGRNFGDYIEILGGLQDGDQVIVSGQINLFDQSPVEIIK
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcggaattattactctacttattattgctgctggcttagcaggaatatttttt
gtgttaaataaaaataaaaagaaaaatgaagctgaaacagcggaggttgccaagaagaat
gcagcaatcgctgtacgtatcgatacagcgaaagtgtcttccatggatttacgctatacc
gcaaatggcaccttctcgcccaaacaggaagtaactgtttcggctcaaactgccggcaga
gttgtgagagtattggtggatgaaggttcgcgtgtgagcgccgggcagaccttggcgatc
attgaaggcgataagctgaatgtcaatgtagccaatgcccaagccgcatataccaatgcg
caggccgatctgcaacgctttgaaagtgcttactcaacagggggggtgaccaaacaacag
ttggatcaggtaaaattacagtttgagaatgcgaagaataacctacaggcttccaaattg
aatgcaggcgacgtaaccatcaaaacatcggtgtctggtattgtcaatgcgcgtaaaatc
gaaccaggtacttacctgaatattggagctccggcctttgatatcgtcaatgtggcgacg
ttgaaattgcgtgttaacgttgatgaaaagaacgttgcaacgttaaagatcggtcagtct
gtggatgtgagtgcaagtgtgtatgccgatgagcgctttacaggaaagataacatttata
gcccccaaatcggacggtagcttaaattttccggtagagatagaggtcaacaatgcatca
aacaaattgcgtgcaggtatgtacggcacagccatctttggtgagggtgttgccaccaac
accttgatcgtgccgcgcaatgcttttgtaggtagtgtgagcgacaacaagatttttgtg
cttaaaaatggtaaagcaattgaaacaacggtcaaatcgggtagaaactttggtgattac
atcgagattttaggtggtttgcaagatggtgatcaggtgattgtatcgggtcagatcaat
ttatttgaccaaagccctgtagaaattattaaatag
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