Sphingobacterium sp. R2: VXM68_19025
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Entry
VXM68_19025 CDS
T10631
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
sprz Sphingobacterium sp. R2
Pathway
sprz01501
beta-Lactam resistance
sprz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VXM68_19025
01503 Cationic antimicrobial peptide (CAMP) resistance
VXM68_19025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprz02000
]
VXM68_19025
01504 Antimicrobial resistance genes [BR:
sprz01504
]
VXM68_19025
Transporters [BR:
sprz02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
VXM68_19025
Antimicrobial resistance genes [BR:
sprz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VXM68_19025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Patched
Motif
Other DBs
NCBI-ProteinID:
XCY04733
LinkDB
All DBs
Position
4558728..4561919
Genome browser
AA seq
1063 aa
AA seq
DB search
MLKKFIERPVLATVISILLVILGVIGILKLPLQQFPDIAPPAVQVTALYPGANAETVLRA
VAPSLEESINGVENMSYMSSTASNDGSLMITVYFKLGTDPDQAAVNVQNRVAQATSQLPA
EVVQAGITTAKQQNSLIMVLDLYTEDQSKYDQTFITNYAQINIIPELKRIPGVGQALAFG
GSKDYSMRVWLNPNQMATYKLTPEEVMAAIQDKNVEAAPGKFGESSREAFEFVIKYKGKL
NQPSDYENIIIRSNTDGSVLKLKDVARVELGSYTYASHTRINGKAGLNIGVMQLAGSNAN
EIQIAIQKFMEKASLSFPKGVKYLVLYNTKDALDQSIDQVKHTLVEAFILVFLVVFLFLQ
DFRSTLIPAIAVPVAIVGTFFFMQLFGFSINLLTLFALVLAIGIVVDDAIVVVEAVHAKM
EHENLPPKLATTSAMSEITGAIISITLVMSAVFLPIGFMEGSTGVFYRQFAFTLAIAIVI
SAINALTLSPALCALFLKPTNHDGHSDAKSLNFKERFFAGFNVGFDRLTKNYLGSLRFLI
RYKWVAFAGLGITLLLTVFMIRKTPTGFIPSEDQGFIAVSLSMPAGASLDRTSGALAEAE
KQLQHADFTKTLNVLAGFNILTQSTSPSAGVAFILLKPHEERGKIKDINAIMADVNQRLA
NIKGANFFVFTFPTVPGFSNVDGLDMVLQDRTGGQLGKFSGIGQKFIGELMKRPEIMMAF
TTFRADYPQYELQVDDIKAEQLGVSTKSILQTMQAYFGSAQASDFNRFGKYYRVMVQADA
KDRSEPTSMDGIFVKNRLGDMVPINTLVKLERVYGPETASRYNLFNSIGINAIPKPGYSS
GDAIRAVEEVAKQQLPTGFTYEFSGMTKEEIVSGGQSTLIFILCLIFVYFLLAAQYESYI
IPLAVILSIPTGIFGVFAAISFTDIANNIYVQVALVMLIGLLAKNAILIVEFAIQGRKQG
LSIPSAALKASRLRLRPIIMTSLAFIVGMIPMMTAVGPSAQGNHSISIAAAGGMFTGVVL
GLFIIPILFIFFQFIQEKIGGAPRQKQHESDVVSLEIPVHTNN
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagaaatttatagaaagacctgtacttgctaccgttatctccatattacttgtc
atattgggggtgattggtatcctaaaactgcctttgcagcagtttcccgatattgcaccg
cccgcggtgcaagtaacggcattatatcccggggcaaatgccgaaacggtgctccgtgcc
gtagctccctcacttgaagagtcaattaatggtgttgaaaatatgagctacatgagctct
accgccagcaacgacggttcgttaatgattacggtatattttaaacttggtacagaccct
gaccaagctgctgtaaacgtccaaaatcgtgtggctcaggcaaccagccaattgcctgct
gaagttgtacaagccgggatcaccaccgcaaagcagcaaaacagcttgatcatggtattg
gacctttacacggaagatcagagtaaatacgatcagacttttattaccaattatgcgcag
atcaatattattcctgaactgaaacggatacccggcgtaggacaagcattggcatttggt
ggtagtaaagactactccatgcgcgtatggctcaatccaaatcaaatggcgacctataaa
ttaacacctgaggaagtaatggccgccatccaagataaaaacgtcgaagctgctccgggt
aaattcggagagagcagccgtgaagcttttgaatttgtaatcaaatataaaggtaaactc
aaccagccaagtgactacgaaaatattattatccgctccaacacagacggttctgtacta
aaacttaaagacgtcgctcgtgtcgaactgggatcttatacctatgcgagtcatacgcgc
atcaacggcaaagcaggattgaatattggggtcatgcagcttgcaggttcgaatgcaaat
gaaattcagattgccattcaaaaattcatggagaaagcctctttaagctttccgaaaggt
gtcaaatatctcgttctatacaatacaaaagatgcacttgatcaatccattgaccaagta
aaacatacgctcgttgaagcatttatattggtatttttagttgtctttctattccttcag
gattttagatcgacattaataccagcgattgcggttccggtagccatcgtgggaacattt
ttcttcatgcagctcttcggcttttcaatcaacctactgactttgtttgctctggtgcta
gccattggtattgtcgtcgatgacgcgattgtggtcgtggaggctgttcatgccaagatg
gagcatgagaacctcccacctaaattggcaacgacatctgccatgagtgaaattacaggc
gccatcatctcgattacattggtgatgtctgccgtattccttccgatcggctttatggaa
ggctctaccggagtgttttatagacaatttgctttcaccctggcgattgcaatcgttatt
tcagcaatcaatgccttgacactaagccctgcgttatgtgcgctcttcttaaaaccaacg
aatcatgatggtcattctgacgctaaaagccttaatttcaaggaacgtttctttgctgga
ttcaatgttggatttgatcggttgacgaagaattatttaggtagtttacgctttttgatc
cgttataagtgggttgcatttgcaggattgggaattaccctacttttgactgtatttatg
atccgtaaaacacctactggatttatcccatcagaagaccaaggattcattgctgtatcc
ttatctatgccagcaggtgcttctttggatcgtacatctggagcattagccgaagcagag
aagcaacttcaacatgctgattttaccaaaactttaaatgtacttgctggtttcaatatt
ttgacacaatctacaagtccatcagcaggtgttgcatttatcctccttaaaccacatgaa
gaacgtggtaagataaaagacatcaatgctattatggctgatgtcaatcagcgcttggca
aatatcaaaggcgcaaatttctttgtctttaccttccctactgtaccaggattcagtaat
gtggatggtttggatatggtactgcaggaccggaccggtggacaacttggaaaattcagt
ggcataggccaaaagtttattggcgaattgatgaaacgtccagaaattatgatggctttc
acaacctttagagcggattatccacaatatgaactccaggtagatgatatcaaagcagaa
caacttggcgtaagtacaaaaagcatcttacagactatgcaagcctattttggtagtgcc
caagcctcagattttaatcgttttggaaagtattatcgtgtgatggtccaagctgatgcc
aaggatagaagtgaaccaacttcaatggacggaatttttgtaaagaacagattgggagac
atggttcccatcaatacattggtcaaattagagcgtgtatatggaccggaaacagcatct
cgttacaacttattcaattcgattggaataaatgcgataccaaaaccaggatatagttct
ggagatgctatccgtgcagttgaagaagttgcaaaacaacaattgccgactggatttact
tatgagttctcaggtatgacgaaagaagaaattgtctcaggaggccaatccacattgatt
tttattctctgtttgatattcgtttactttctgcttgcagcacaatatgaaagctatatc
attccattggcggttattctctctattcctacaggtatatttggggtctttgcagcaatt
agcttcactgatattgccaacaacatctatgtacaagtcgcactcgttatgttgattgga
ttattggccaaaaatgccattctgatcgtagaatttgccatccaagggcgcaaacaggga
ctatcaattcctagtgccgcacttaaagcatcgagattacgtttgagacctattattatg
acttctttagcttttatcgttggtatgattccaatgatgacagcagtaggtccatcagcg
caaggaaatcactcaatcagtattgccgctgcgggagggatgtttactggagtagtttta
gggctctttattatccctattctctttattttcttccaatttatccaagagaaaatcgga
ggtgctccacggcaaaaacagcatgaaagcgatgtcgtttcattagaaatacccgtgcat
acaaacaattag
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