Streptococcus pyogenes SSI-1 (serotype M3): SPs1363
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Entry
SPs1363 CDS
T00119
Name
(GenBank) putative DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
sps
Streptococcus pyogenes SSI-1 (serotype M3)
Pathway
sps03030
DNA replication
sps03410
Base excision repair
sps03420
Nucleotide excision repair
sps03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPs1363
03410 Base excision repair
SPs1363
03420 Nucleotide excision repair
SPs1363
03430 Mismatch repair
SPs1363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sps03032
]
SPs1363
03400 DNA repair and recombination proteins [BR:
sps03400
]
SPs1363
Enzymes [BR:
sps01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
SPs1363
DNA replication proteins [BR:
sps03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SPs1363
DNA repair and recombination proteins [BR:
sps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
SPs1363
NER (nucleotide excision repair)
GGR (global genome repair) factors
SPs1363
MMR (mismatch excision repair)
DNA ligase
SPs1363
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SPs1363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
HHH_3
NuA4
Motif
Other DBs
NCBI-ProteinID:
BAC64458
UniProt:
P0DA73
LinkDB
All DBs
Position
complement(1352645..1354603)
Genome browser
AA seq
652 aa
AA seq
DB search
MKKRIKELTDLLNRYRYDYYTKDAPSVSDSDYDKLYRELVTLEQSYPEYVLQDSPTQQVG
GTILKGFEKYRHQYPLFSLQDAFSREELDAFDKRVKAEFPNATYLAELKIDGLSISLSYE
NGFLQVGATRGDGNIGENITENIKKIKDIPHQLSEPLTITVRGEAYMSRQSFKAINEGRQ
ENGETEFANPRNAAAGTLRQLDTAVVAKRQLATFLYQEVSPTARNQQNEVLAELADLGFS
VNPYYQLTSSMDEIWDFIKTIEAKRDQLAYDIDGVVIKVNSLAMQEELGFTVKAPRWAIA
YKFPAEEKEAEILSVDWTVGRTGVVTPTANLTPVQLAGTTVSRATLHNVDYIAEKDIRIG
DTVIVYKAGDIIPAVLNVVMSKRNQQEVMLIPKLCPSCGSELVHFEDEVALRCINPLCPS
LIQRSLEHFASRDAMNITGLGPAIVEKLFLAGFVHDVADIYQLTKEDFMQLDGIKEKSAD
KLLAAIEASKSNSAEKLLFGLGIRHIGSKVSRLILEVYGDISALLTAKEEEIARIDGLGS
TIAQSLTQYFEQKTAAILVDELKTAGVNMHYSGQKVNSDAALFGLTVVLTGKLNQLNRNE
AKDKLEALGAKVTGSVSKKTDLVIAGSDAGSKLEKAKSLGIRIEDEDWLRQL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacgcataaaagaattaacagatcttcttaaccgttaccgttatgactattat
actaaagatgccccatcagtttctgacagtgactatgataagctttatcgtgaactggtg
actttagagcagtcatatcccgagtatgtcttgcaagatagcccaacgcagcaggttgga
gggactattttaaaggggtttgaaaaatatcgacatcagtatccgctttttagtttgcag
gatgctttttcacgtgaggagctggatgcttttgataagcgcgtcaaggccgaatttccg
aatgccacctatctagcagagttaaaaattgatggtttatctatttccttgagttatgag
aatggcttcttacaggttggagcaacacggggtgatggcaatatcggtgaaaatattaca
gaaaatatcaaaaaaataaaggatattcctcaccaattgagtgagcctttaaccatcacc
gttcgaggagaggcttacatgtctcgtcagtcctttaaagcgatcaatgaaggacgccaa
gaaaatggggagactgaatttgctaatcctagaaatgctgccgctgggacactaaggcag
ctagatacggcagtggttgctaagcgtcaactagccacttttttgtatcaagaagttagt
ccgacagctagaaatcaacaaaatgaggtcttagcagaattagcagatctaggtttttca
gtaaatccgtattatcaactcacatcgtctatggatgagatttgggattttatcaaaact
attgaggcaaaaagagatcaattagcttatgacatagatggcgttgttattaaagttaat
agtctagccatgcaagaagagctagggtttacggttaaagctccacgctgggccattgct
tacaaatttccagcagaagaaaaagaggcagaaatcctttcggttgactggacagtggga
cgaacaggcgtggtcacacctacagcgaatctaactcctgtgcaactagcggggacaacc
gtgagtcgtgcaaccctacataatgtggattatattgccgaaaaagatatccgtattggc
gatacagtgattgtatataaggcaggggacattattcctgctgtcttaaatgtcgttatg
agtaagcggaaccagcaagaagtcatgcttattcctaaactatgcccatcttgtggtagt
gaattagttcattttgaagatgaggttgctttgcgttgtattaatccgttgtgtcctagt
ttgattcagcgaagtttggagcattttgcaagtcgtgatgccatgaacattactgggctg
ggaccagctattgtggaaaaactatttttagcggggtttgttcatgatgttgctgatatt
taccagttgaccaaagaagatttcatgcaattagatggcatcaaagaaaagtcagctgat
aaattgctcgctgcgattgaggcttctaaatcaaattcagctgaaaaactgttatttggt
ctaggaattcgtcatattggctctaaagttagtcgcttaattttagaggtatacggagat
atttctgctcttttaaccgctaaagaagaggaaatcgcaaggatagatggccttggctca
acgattgctcaatcacttactcaatactttgaacaaaaaacggctgcgattttagtagac
gagttaaagacagcaggtgtcaacatgcattactcaggtcaaaaagttaatagtgacgca
gcgctttttggtctaactgttgttttaactggcaaattaaatcagctgaaccgaaatgag
gccaaagataaattagaggcattaggtgccaaagttactggaagtgtatctaagaaaaca
gatttagttattgcaggtagtgacgctggttctaagctagaaaaagcaaagagcttagga
attcggattgaagatgaagattggctacgccagctttaa
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