Sphingobacterium psychroaquaticum: E2P86_06090
Help
Entry
E2P86_06090 CDS
T05967
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
spsc
Sphingobacterium psychroaquaticum
Pathway
spsc01501
beta-Lactam resistance
spsc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spsc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E2P86_06090
01503 Cationic antimicrobial peptide (CAMP) resistance
E2P86_06090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsc02000
]
E2P86_06090
01504 Antimicrobial resistance genes [BR:
spsc01504
]
E2P86_06090
Transporters [BR:
spsc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
E2P86_06090
Antimicrobial resistance genes [BR:
spsc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
E2P86_06090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QBQ40746
LinkDB
All DBs
Position
complement(1478342..1481512)
Genome browser
AA seq
1056 aa
AA seq
DB search
MISEVFIKRPVTAIVISILIMIIGTISIMTLPISQYPTIAPPTVTVTANYTGADAQTVEQ
TVTTPIESQINGTPGMIYMSSNSTSNGQSSITVTFEVGTDIDIATLDVQNRVGIAEPSLP
EAVRRLGVTTRKANTDILMLVSLVSPKGTRDDKFLANYANLYIKDAIMRVKGVGDVTAFG
QPFSMRVWLDANKLTALNLTPADVSSAISEQNLRIPGGSVGAPPQQSSQVFEYPVITDSD
LSSVQDFEEIIIKSNTDGSIVTLKDVARVELGQFSYSTTTKTDGMRSTGMMISQTPGGNA
VETADGIYSALEGLKKSFPEDVDYVVGYETISVVNASIESVIHTLVEALILVTLVVFFFL
QSWRATLIPVLAIPVSIVGTFIFFSLFGFSINNLTLLAFVLAIGIVVDDAIVVVEAVQHY
IDHYGMSAKEATSRAMHDITAPVIAIALILAAVFIPVGFIPGMVGKLYQQFAITIAVSVM
ISAFIALSLTPALCSLLLKPTSVNENAKGLNKFFYKFNLWFARVTHKYSNGVKACIKKAP
LALIILLCVFVGTGYMFKTKPTGFIPTEDNGSFFAGVTLPEGSSAARTEVVLNELETQFR
KDYPEIEHITLISGINILNRSFKSNGATLFVSLKPWKDRKRTAADITGAIMGKYRGYDKA
RVLAVTPPAIPGLGTSGGFSLLIQDHQTVDIKEFEGVVGKFLAAANQRPEIGMAYTLFNS
NSPNFKISVNREQAKKMAVPVSSVYSTISAYLGSAYINDFTRYGRNFRVVTQAEQDFRMN
IEDINKLYVKNLNGASVPLSSLVTWELVQNPSIINHYNIFRSIEVSGSAAPGYSSGDALR
ALEEVAAQTLPNGYGYDFSGLSLQEKQSGNMTVMIFALCIVFVFLLLASLYESWSVPFSI
LLSVPIGIFGAILTLLFIPALDNNIYAQIGLVTIIGLAAKNAILIVEFAKERVDIGMPLL
DATLDAVKLRLRPIIMTSFAFILGIIPLMLSTGAGAFSRQTIGWTVFGGMMAATLMGIFI
IPVLFYVITKMAYGKKKLAELEANFDEEKAKNLSSH
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgatatcagaagtatttataaaaaggcccgtcaccgcaatcgtaatatctatattaatc
atgattataggtacgatttcgattatgacgttgccaatcagtcaatatccaaccattgcc
ccaccaacggtaaccgttacagcaaactatacaggtgctgatgcgcaaactgtggaacaa
acggtaaccacgcctatcgaaagtcagattaacggtacgccaggaatgatctacatgtca
tccaacagtacatccaacggacaatccagtatcaccgtaacctttgaagtaggtaccgat
attgatattgctacacttgatgttcagaaccgtgtaggtattgccgaaccatcccttcca
gaggctgttcgtcgtttaggggtcaccactcgtaaagcaaacaccgatatcttgatgttg
gtatccttggtttctcctaaaggaacacgggacgataagttcttggccaactacgccaac
ttatacatcaaagatgcgattatgcgtgtaaaaggtgtgggtgatgtgaccgctttcggt
caaccgttctccatgcgtgtatggttagatgcaaacaagctgacagccttaaatcttacg
ccagcggatgtttcgagcgcaatttccgagcaaaacttaagaattccaggcggatccgtt
ggggctccaccgcaacaaagctctcaggtttttgagtatcctgttattacagactctgat
ctttcatcggttcaggattttgaagaaattattattaaatccaataccgatggttctatc
gtgacactaaaagatgtggcacgtgttgaattaggtcagtttagttattccacaaccact
aaaacggatggtatgcgatcaaccggtatgatgatatcgcaaacaccaggtggtaacgct
gtggaaacagctgacggtatatacagcgccttagaagggctgaaaaaatcattccctgaa
gatgtagactacgtcgtaggatatgaaacaatttccgtagtcaacgcttctatcgaatcg
gttatacatacccttgtcgaagccttgattttggttacgctcgtggtgttcttcttctta
caatcgtggcgtgcaacattaattccggtacttgctatcccggtatctatcgttggtaca
tttatcttctttagtttatttggattctccatcaacaaccttaccctacttgcattcgta
ctggcaatcggtatcgtagtggatgatgccattgttgtggtagaggccgtacagcactat
atcgaccattatggaatgagtgctaaagaagcaacgagcagagccatgcacgacatcacc
gcgccggtaattgcgatcgccttaatcttggcggcggtgtttattccagtaggttttatt
ccaggaatggtaggtaaactttatcagcagttcgccataaccattgcggtatcggttatg
atatcggcatttatagccctttcattaactcctgccctgtgttcgttactcttgaaacca
acatcggtaaacgagaatgcaaaaggtctaaacaaatttttctataagtttaacctttgg
tttgctcgtgttacccacaagtattcgaacggtgtaaaggcctgtatcaaaaaagcacca
ttagcattaattatcctcctttgtgttttcgttggaacaggctatatgttcaagactaaa
cctacaggctttattccaacagaagacaatggatcattctttgctggggttacactaccg
gaaggatcttctgccgctagaaccgaagtggtgttgaacgaactagaaacacaattccgg
aaagactatccagagattgaacatatcaccctcatatcgggtatcaacatcttaaacaga
tcctttaaatccaatggtgccacactctttgtgtcgttgaaaccatggaaagatcggaaa
cgtacagctgctgatattacgggtgcgattatgggtaaatatcgtgggtatgataaagcg
cgtgtacttgcggtaactccaccagcgattcctggattaggtacatctggaggtttctct
ctcctaattcaggatcaccagaccgtagatatcaaagaatttgaaggtgtcgtaggtaaa
ttcctggcagcggcaaaccaacgtccagaaattggaatggcctataccctatttaactcg
aattcgccaaactttaagatttctgttaatagagaacaagcgaagaaaatggcggtgccg
gtatcatcggtctacagtacgatctcggcttatttaggttccgcttatattaatgatttc
acgcgctacggacgtaacttccgtgtagtaacacaagcggagcaagatttccgtatgaat
atcgaagacatcaacaaattgtatgttaagaatctaaacggtgcctccgtaccgttaagt
agtttggtaacatgggagttagtacaaaatccttccatcattaatcactataatatcttt
agaagtatcgaggttagtggttccgccgctcctggatatagttctggagatgcgttacgc
gcactcgaagaagttgctgcacaaacgctaccgaacggttacggctatgacttctcgggc
ttatcattacaggaaaaacaatcaggtaatatgaccgtgatgatcttcgcgctgtgtatt
gtctttgtattccttttattggcctcattatacgagagttggtcggttccgttctccatc
ttattatcggtgccgattggtatctttggagcgatcctgacactcttgtttatcccagca
ttggataacaacatctatgcgcagattggtttggtaaccatcattggtttggcggcaaaa
aatgcgatcctgatcgtcgagtttgcgaaagaacgggtggatatcggaatgcctttgctc
gatgcaacattagatgccgtcaagcttaggttacgaccaattatcatgacttcatttgcc
tttatcttagggattattcctttgatgctctctacgggagcgggcgcgttctctcgccaa
acaattggctggaccgtattcggtgggatgatggcagcaacattaatgggaatctttatt
attcccgtgttgttctacgtgatcaccaaaatggcttatggcaagaaaaaactagccgag
cttgaagcgaatttcgatgaagaaaaagcaaagaacttaagttcacactaa
DBGET
integrated database retrieval system
