Staphylococcus shinii: JMB28_07545
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Entry
JMB28_07545 CDS
T08256
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
spsd
Staphylococcus shinii
Pathway
spsd00020
Citrate cycle (TCA cycle)
spsd00785
Lipoic acid metabolism
spsd01100
Metabolic pathways
spsd01110
Biosynthesis of secondary metabolites
spsd01120
Microbial metabolism in diverse environments
spsd01200
Carbon metabolism
spsd01210
2-Oxocarboxylic acid metabolism
Module
spsd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spsd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
spsd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JMB28_07545
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JMB28_07545
Enzymes [BR:
spsd01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
JMB28_07545
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Paralog
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
QRA15514
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Position
1564441..1567242
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AA seq
933 aa
AA seq
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MSNESQVSEAPVNFGANLGYVLDLYDIYLNDPSAVPEDLQVLFSTIKNGEANITTNNEGQ
SNITKGDSTIKRVMRLIDNIRQYGHLLADIYPVNRPERENVPKLTIEDFNLDKETLESIS
AGIVSDHFKDIYDNAYEAIVRMEKRYKGPIAFEYTHINNNRERVWLKRRIETPYKATLND
NQKIELFKNLAHVEGFEKYLHKNFVGAKRFSIEGVDTLVPMLQQTLRIASDEGIQNIQIG
MAHRGRLNVLTHVLEKPYEMMISEFMHTDPMKFLPEDGSLELTSGWSGDVKYHLGGVKTT
QSYGIEQKISLANNPSHLEIVSPVVLGKTRANQDTTDKPGSITTEFKKSMPILIHGDAAY
PGQGINFEAMNLGNLDGYSTGGSLHIITNNRIGFTTEPQDGRSTTYSSDVAKGYDVPIMH
VNADNVEATIEAIEIAMAFRKEFNKDVVIDLVGYRRYGHNEMDEPSITNPLPYHEIRKHE
SVEILYGKQLVSENIISEDEMNNIIDDVQKTLRAAHDKIDKNDKMDNPEMQRPESLAEPI
QNDDSELSFEQLKEINDAMLTYPSNFNVLKKLNKVLEKRKEPFESEDGLVDWAQAEQLAF
ATITQNGTPIRLTGQDSERGTFSHRHAVLHDPETGEQYVPLHNVPDQKATFEVRNSPLSE
AAVVGFEYGYNVQNKSCMTIWEAQYGDFSNMAQMIFDNFLFSSRAKWGERSGLTLFLPHS
FEGQGPEHSSARLERFLQLAGENNSTIVNLSSSSNYFHLLRAQAANLGTQSMRPLVVMSP
KSLLRNKTVADPISKFTSGKFEPILPEDHDKSAVKKVILASGKMFIDLKEYLAKNPKDSI
LIVAVERLYPFPADEINALLNELPNLENVAWVQEEPKNQGAWSFVYPYLKELTTDKYDLS
YHGRIQRSAPAEGDGEIHKLVQNMIIEQSTNIN
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgaaagtcaggtttccgaggcacctgtaaatttcggagcaaatcttggatat
gttttagatttatatgatatatatctaaatgatcctagtgcagttcctgaagatttgcaa
gtcctttttagtacaattaaaaacggtgaagcaaacatcacaacaaataatgaaggtcag
agtaacataactaaaggggatagcacaatcaaacgtgttatgcgccttatcgataatatt
cgtcaatatgggcatttgttggcagatatttatcctgttaatagacctgaaagagaaaat
gttcccaagttaacaatcgaagattttaatttggacaaagaaacacttgaatctatttca
gctggaattgtttctgaccattttaaagacatctatgataatgcatacgaagcaattgtg
cgtatggaaaagcgttacaaaggtccaattgcctttgaatacacacatattaataataat
agagaacgtgtatggttaaaacgtagaattgaaactccatacaaagcaacattaaatgat
aatcaaaaaattgaactatttaaaaacttagcccacgtagaaggttttgaaaaatattta
cacaaaaactttgttggagctaaacgcttctccatcgaaggtgtagatactcttgtgcct
atgctacaacaaacattaagaattgcgagcgacgaaggcattcaaaatatccaaatcggt
atggcccatcgtggaagattaaatgttttaacacatgttctagaaaagccatatgaaatg
atgatttctgaatttatgcacacagatccaatgaaattcttgcctgaagatggcagttta
gaattaacatccggttggtctggtgatgttaaatatcatcttggcggagtgaaaacaacg
caatcatatggtattgaacaaaaaatctcattggcaaacaacccaagtcatttagaaatc
gtatcaccagtagtccttggtaaaacacgtgctaatcaagatacaactgataaaccaggc
tcaataactaccgaatttaaaaaatctatgcctatattaattcatggtgacgccgcttat
cctggtcaaggtattaactttgaagctatgaacttaggtaatttagatggttattcaaca
ggtggttcacttcacattattacaaataaccgtattggctttacaaccgaacctcaagac
ggacgttctacaacatattcttcagatgttgcaaaaggatatgacgttccaatcatgcat
gtaaatgctgataatgttgaagcaacaattgaagcaattgaaattgctatggcgttcaga
aaagagttcaataaagatgtagtcatcgatttagtaggttatcgtcgatacggacacaat
gaaatggatgaaccatcaatcacaaacccactaccatatcatgaaatacgtaaacatgag
tcagttgaaatcttatacggaaaacaacttgtcagcgaaaatatcatttcagaagatgaa
atgaataatatcattgacgatgtccaaaaaactttaagagctgctcatgataaaattgat
aaaaacgacaaaatggacaacccagaaatgcaaagacctgaaagtttagctgaaccaata
caaaacgacgattctgagttaagctttgagcaattaaaagaaattaatgacgcaatgctt
acttatccttcgaacttcaatgtattgaaaaagctaaataaagtgctagagaaacgtaag
gaaccatttgaaagtgaagatggattagttgactgggctcaagcagaacaattagctttt
gcaactatcactcaaaatggaacaccaatacgtttgactggtcaagacagtgaacgtggc
acattcagtcaccgtcacgctgtgttgcacgatccagaaaccggcgaacaatatgtacca
ttacacaacgtacctgatcaaaaagcaacctttgaagtacgtaactctccattatcagaa
gctgcagttgtaggttttgaatatggctataatgtgcaaaataaatcatgtatgacaatt
tgggaagcacaatacggggacttttcaaatatggctcaaatgattttcgacaacttctta
tttagttctcgcgctaaatggggagaacgttcaggattaactttattcttgcctcattca
tttgaaggtcaaggtccagaacactcatctgcacgtttagaaagatttttacaattagct
ggtgaaaataattcaactatcgttaatttatctagttcaagcaactacttccatttatta
cgtgcacaagcagcgaatttaggtacacagtctatgagaccattagtggttatgtcacct
aagagcttattacgtaataagactgttgcagatcctataagtaaattcacttccggtaaa
ttcgaaccaattttaccagaagatcacgataaatcagcagtgaaaaaggttattttagca
tcaggtaaaatgtttattgatttaaaagaatatttggcaaaaaacccaaaagattctatt
ttaatcgtagcagtagaaagactttatcctttccctgccgatgaaattaatgcattatta
aacgaattacctaatttagaaaatgtagcttgggtacaagaagaacctaagaaccaaggt
gcatggtcattcgtttatccttatctaaaagaattaacaactgataaatacgatttaagt
tatcacggtcgtatccaacgttcagctcctgctgaaggtgatggtgaaattcacaaactc
gtacaaaatatgataatcgaacaaagtacaaacattaactag
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