Shewanella psychropiezotolerans: FM037_00815
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Entry
FM037_00815 CDS
T07745
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
spsh
Shewanella psychropiezotolerans
Pathway
spsh01501
beta-Lactam resistance
spsh01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FM037_00815
01503 Cationic antimicrobial peptide (CAMP) resistance
FM037_00815
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsh02000
]
FM037_00815
01504 Antimicrobial resistance genes [BR:
spsh01504
]
FM037_00815
Transporters [BR:
spsh02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
FM037_00815
Antimicrobial resistance genes [BR:
spsh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FM037_00815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QDO82031
LinkDB
All DBs
Position
174995..178138
Genome browser
AA seq
1047 aa
AA seq
DB search
MARFFIDRPIFAWVIAIIVMLAGVLSIFGLPVSQYPSIAPPSVVISAVYPGASAKTMEDS
VTQVIEQRMTGLDNLRYISSTSDSFGNAQITLTFNAEADPDIAQVQVQNKLQLAMPLLPQ
EVQAQGVNVSKSSAGFLMVLGFVSQDGSLDKNDISDYVASNIQDPMSRVAGVGTIQLFGA
QYAMRIWLDPFKLTQFNLTSIDIMASIREQNAQVSAGQLGGAPSVGGQELNATVSAQSRL
QTVDQFEQIIIKSDSSGANVYLKDVARVELGAEDYSSESFYNGKPAAGIGIQLATGANAL
ATANAVRAKIDEMKAFFPQGLEVVYPYDTTPFVEQSIEGVVHTLLEAIVLVFLIMFLFLQ
NFRATLIPTIAVPVVLLGTFAILSAVGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
QEEGLSPVEATKKSMDQITGALVGIGLTLSAVFVPMAFMSGSTGVIYRQFSVTIVSAMGL
SVMVALILTPALCATMLKPMKKGQTHIDTGFFGWFNRSFDKMTSRYTDSVAAMIKRTGRV
MLIYLALVVAVGWIFMRMPTAFLPDEDQGIMFTQAILPVNSTLQSTQKVMEDVTDFYLNE
ESENVKSVFTVSGFSFAGNGQNMGIAFVSMKDWAEREGAGQDIQSVAARAMGKFMQMKEA
FVFAFVPPAVIELGTANGFDFYLQDRNGQGHDKLVEARNMLLGLASQNPNLTGVRPNGQE
DAPMYQIHIDQAKIRALSVDINSVNSVLGTAWGGSYVNDFIDRGRVKKVYVQGEAEYRMQ
PEDLDSWYVRNTKGEMVPFSAFATGTWEYASPRLERFNGLPAMNIQGGTAPGYSTGAAMV
DIEEMVKKLPPGFGVEWNGLSYEERLSGNQAPALYALSIVVVFLVLAALYESWSVPFAVI
LVVPLGIIGALIAMNARGLPNDVFFQVALLTTVGLATKNAILIVEFAKEYYDKGATLVDA
TLHAVRVRLRPILMTSMAFGLGVVPLAISTGVGSGSQNAIGTGVLGGMMSSTFMGIFFIP
IFFVVVERIFSKREKKKAVEAETSATL
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtttctttatcgatcgccctatttttgcttgggtgatcgccatcattgtgatg
ctggctggggtcttgtcgatcttcgggctacccgtatctcagtatccgagtatcgcaccg
ccatcggttgtgatcagcgccgtttatcctggtgcatcagctaaaaccatggaagattcg
gtgactcaggtcatcgagcagcgaatgacgggtctggataacctgcgttatatatcatca
accagtgatagtttcggtaatgcgcagatcaccttgaccttcaatgcggaggccgatcct
gatattgctcaggtacaagtgcagaacaagttacaacttgctatgccgttgttacctcag
gaagtacaggctcaaggtgtcaacgtcagtaagtcgagcgctggtttcttgatggtattg
ggcttcgtttcccaagatggttctttggataagaacgatatctcggattatgtggcttct
aacatacaagatcccatgagtcgtgtagctggtgtgggtactattcagctatttggtgct
cagtatgcgatgcgtatctggttagatcccttcaagctgactcaatttaatctgactagc
atagacatcatggcctctatacgtgagcagaatgctcaggtatctgcgggtcagttaggt
ggtgctccatcagttggtggacaggagcttaatgcgactgtatccgctcagagtcgtttg
cagacagtagatcagttcgaacagatcatcatcaagtcagattccagcggtgcgaatgtg
tatctcaaggatgtggctcgggttgaactcggtgcagaggactattcgtcggagtcgttt
tataacggtaagcctgcggcgggtattggcattcaattagcgaccggtgctaatgcattg
gcaacggctaacgcagtacgggctaagattgacgagatgaaggccttcttccctcagggg
cttgaagtggtttatccctatgatacaacgccattcgtagagcaatctatcgaaggtgtt
gtgcataccttgctcgaagccattgtcctcgtcttcctaatcatgttcctgtttctgcaa
aacttcagggcgacactcattccgaccatagccgtgcctgtggtgctattggggaccttc
gctattctgtcggcggtcggtttctccatcaacaccttgaccatgtttgccatggtattg
gccatcggcttgctggtggatgatgccatcgtggtggtggaaaacgtcgaacgtgtgatg
caggaggaagggctaagccccgtcgaggccaccaagaaatccatggatcaaatcaccggc
gccctggtgggtatcggtttgaccctatcggcagtattcgtgcctatggcatttatgtct
ggctcgaccggtgtcatctatcgccagttttcggtgacgatagtgtcggccatggggctc
tcggtgatggttgccttgattctgactcccgctctgtgtgccaccatgcttaagccaatg
aagaaaggtcagacgcatattgacactggcttcttcggttggtttaaccgcagcttcgac
aagatgacatcgcgttacaccgacagcgtcgcagccatgattaagcgtacaggccgtgtc
atgttgatctatctggcactcgtcgtcgccgtgggttggatcttcatgcgtatgcccact
gctttccttcccgatgaagatcagggcatcatgtttactcaggctatcttgcctgtgaac
tcgactctgcaaagtactcagaaggtgatggaagatgtcaccgacttctacctcaacgaa
gaaagtgaaaatgtgaagtctgtatttactgtatctggcttcagcttcgcgggtaacggt
cagaacatgggtatcgccttcgtcagtatgaaggactgggctgagcgtgaaggtgccgga
caagatattcaatcagtcgcagctcgtgccatgggtaagtttatgcagatgaaggaagcc
ttcgtatttgcattcgtacctcctgcggttatcgaactaggtacggcaaacggtttcgac
ttctatctccaggacagaaatggccaaggccatgacaaacttgtggaagcgagaaatatg
ttgctcggcttggcatcacagaaccctaacttgacaggcgtacgcccgaacggtcaggaa
gatgcgcctatgtaccaaatacatatagatcaggctaagatccgtgccttgagtgtcgat
atcaactcggtgaacagcgtgctgggtacggcctggggtggttcatatgtgaatgacttc
atcgatcgtggtcgagttaagaaagtgtatgtacaaggtgaagccgagtaccggatgcag
cctgaagatcttgattcctggtatgtacgtaataccaaaggggagatggtacctttctcg
gcttttgccacgggaacttgggaatatgcatcgcctcgactggagcgattcaacggtctg
cctgcgatgaacatccagggtggaacggcacctggctatagcacgggtgctgccatggtc
gatatcgaagagatggtgaagaagttaccaccgggattcggtgtcgagtggaatggtcta
tcctatgaggaacgcctatcaggtaaccaggctccggctctgtatgccctgtctatcgta
gtggtatttttggtactggcggcgctctatgagagttggtctgtgcctttcgcggtgatc
ttggtggtgcctctgggcattatcggtgcgcttatagccatgaatgcccgcggtttgcct
aatgacgtattcttccaggtggcgctattaacgacggtgggactggcgacgaagaacgcc
attctgatcgtagagtttgccaaggaatattacgacaaaggggcgactcttgttgatgct
accttgcatgcggtacgggtgcgcttgcgtcctattctgatgacctctatggccttcggt
cttggtgtggtacctcttgccataagtaccggtgtaggttcaggtagtcagaacgccata
ggtacaggtgtattgggcggcatgatgagttctaccttcatggggatcttcttcatccca
atcttcttcgtggttgtcgagcgtatcttcagcaaacgagagaagaagaaggcagtcgaa
gccgagaccagtgctacgctgtag
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