Shewanella psychrotolerans: K0I62_00145
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Entry
K0I62_00145 CDS
T09306
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
spsj
Shewanella psychrotolerans
Pathway
spsj01501
beta-Lactam resistance
spsj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0I62_00145
01503 Cationic antimicrobial peptide (CAMP) resistance
K0I62_00145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spsj03036
]
K0I62_00145
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsj02000
]
K0I62_00145
01504 Antimicrobial resistance genes [BR:
spsj01504
]
K0I62_00145
Chromosome and associated proteins [BR:
spsj03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
K0I62_00145
Transporters [BR:
spsj02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
K0I62_00145
Antimicrobial resistance genes [BR:
spsj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K0I62_00145
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
BSH_CzcB
BSH_CusB
YknX_C
Beta-barrel_RND_2
HH_CyaD
HH_AAEA_pHBA
HH_EMRA
HH_CzcB
HH_YBHG
Arabino_trans_N
GPS2_interact
Motif
Other DBs
NCBI-ProteinID:
QYK01453
LinkDB
All DBs
Position
32128..33288
Genome browser
AA seq
386 aa
AA seq
DB search
MRQIVKIASVIGVALWITGCGQQEAQSQSAAAPRSTEVGVIKVVAQPQAIQVELPGRSKA
FLEAEVRPQVSGIITERGFVEGAEVKKGQSLYQIDSSTYRAALVSAEADLARANASLASA
KAKAARYKALLTTNAISEQDFDEADAAYKEALAGVTVAKAAINTATINLEYTQVQAPISG
RIGKSSVTAGALVTANQSQTLATIQQLDPINVDIAQSSAQLLRLKAKLKQGSLQATENAD
VTLVLEDGSQYPHSGTLQFSEVSVDENTGSVTLRAEFPNPDGVLLPGMYVRAVLNAGTDP
KAILVPQKAITRNTKGQAVAMVIGADNKVEPRVVTTAEVIDHQWRITDGLAVGDQLIVEG
LQKIRPGAAVIGKPISDMTSDKQQQK
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcggcaaatagttaaaattgcctcagttattggtgtggcgttatggataacgggttgt
ggtcagcaagaggcacaaagtcagtcagctgcggctccacgaagtaccgaagtcggtgtg
atcaaggttgttgctcaaccacaagcaattcaagtcgaattgccagggagaagcaaggca
ttcttagaggctgaggttagacctcaggtttccggtatcattaccgagcgcggcttcgtt
gagggcgctgaggttaaaaaaggacagtcgctgtaccaaattgactcgtcaacttatcga
gctgctttagtgagtgctgaagcggatctcgctcgtgcaaatgcaagcttagcttcggct
aaagcgaaagctgcccgttataaggcgctgctaacaacgaatgcaattagtgaacaagac
tttgatgaagcggatgcggcttataaagaagcattagcgggtgtcaccgttgctaaagct
gcgataaatactgcaacaattaatcttgagtatactcaagttcaagcgccgatctctggc
cgtattggtaaatctagtgtcaccgctggtgcattggttacggcgaatcaaagccaaacc
ttagcgacgattcaacagcttgatcctattaacgtcgatattgcgcaatcgagtgcgcaa
ctgctccgtttaaaagccaagctaaaacagggctcattgcaggctacagaaaatgctgac
gtgaccttggttctggaagatggcagccaataccctcattctggtacgctacagttttct
gaggtgagtgttgatgaaaatacagggtcggtcactttacgtgctgaattccctaaccct
gatggcgtattgctacctggtatgtatgtacgtgccgtgctcaatgcgggtacagatccg
aaagcgatactcgttcctcaaaaggcgataacccgcaataccaaaggccaagccgttgct
atggtcattggtgctgacaacaaagttgaaccacgcgttgtcactactgccgaggttatt
gatcatcagtggcgtataaccgatgggttggctgtaggtgatcaactgattgttgaggga
ctacaaaaaattcgtccaggagcagctgttatcggtaagcctataagcgatatgacatca
gataagcaacaacaaaagtag
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