Shewanella psychrotolerans: K0I62_00150
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Entry
K0I62_00150 CDS
T09306
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
spsj
Shewanella psychrotolerans
Pathway
spsj01501
beta-Lactam resistance
spsj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0I62_00150
01503 Cationic antimicrobial peptide (CAMP) resistance
K0I62_00150
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsj02000
]
K0I62_00150
01504 Antimicrobial resistance genes [BR:
spsj01504
]
K0I62_00150
Transporters [BR:
spsj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K0I62_00150
Antimicrobial resistance genes [BR:
spsj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K0I62_00150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QYK01454
LinkDB
All DBs
Position
33298..36450
Genome browser
AA seq
1050 aa
AA seq
DB search
MARFFIDRPIFAWVIAIIVMLAGVLSIMNLPVSQYPSIAPPTVTISAVYPGASAKTMEDT
VTQVIEQRMTGIDHLRYISSTSDSFGNAQITLTFNAEADPDIAQVQVQNKLQLAMPLLPQ
EVQAQGVKVNKSSSGFLMVLGFVSQDGSLDKNDISDYVGSNIQDPMSRVAGVGEIQLFGA
QYAMRIWLDPLKLTQYNLTSQDILASIREQNAQVSAGQLGGAPAIKGQVLNATVSAQSRL
QTAEEFKKIIIKSDTSGAKVFLEDVARVELGAESYAVESYYNGKPAAGLAIKLATGANAL
ATAELVREKIDEMKPFFPQGLDVVYPYDTTPFVDKSIEGVVHTLIEAVVLVFVIMYLFLQ
NFRATLIPTIAVPVVLLGTFAVLSAAGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
QEEGLSPLEATRKSMDQITGALVGIGLTLSAVFVPMAFMSGSTGVIYRQFSVTIVSAMAL
SVMVAIILTPALCATMLKPIAKGHHGIETGFFGWFNRSFDKMTSRYEASVAAMIKRAGRV
MLIYLALTVAVGWIFMRMPTAFLPDEDQGILFTQAILPTNSTQESTKKVMEKVTDFYLDQ
EGDNVKSVFSVSGFSFAGSGQNMGLAFVGLKDWSERKNPGQDIQSISRRAMGAFSQMKEA
FVFAFVPPAVIELGTANGFDFYLQDRNGQGHEKLLEARNMLLGMAAQNPNLVGVRPNGQE
DAPMYQIHVDHAKLRALGVDIDSVNSVLGTAWGGSYVNDFIDRGRVKKVYVQGDAQYRMQ
PEDLDSWYVRNAQGEMVPFSAFATGSWEFGSPRLERFNGLPAMNIQGGTAPGYSTGTAMA
DIEAMVDKLPPGFGVEWNGLSYEERLSGNQAPALYALSIMVVFLVLAALYESWSVPFAVV
LVVPLGIIGALLAMNGRGLPNDVFFQVGLLTTVGLATKNAILIVEFAKDFYDQGAGLVEA
TLHAVRVRLRPILMTSLAFGLGVVPLAISSGVGSGSQNAIGTGVLGGMMSSTFLGIFFIP
IFFVIVERIFSKRERNGGSDAAKVDSPIKD
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtttttttatcgatcgccctatctttgcctgggtgattgcaattattgttatg
ttggccggggtgctttctattatgaacctccccgtgtctcaatacccgagtatcgcaccg
ccaacagtgacgattagtgctgtttatccaggcgcatcagctaagaccatggaagatacc
gttactcaggtgattgagcagcgtatgacgggtattgaccatctacgttatatctcgtca
accagtgacagttttggtaatgctcagatcaccttgacctttaatgccgaggcagatcct
gatatcgctcaggttcaggtgcagaacaagttacaacttgctatgcctctgttacctcaa
gaagtgcaggcgcaaggggttaaggttaacaaatccagctcgggtttcttgatggtactc
gggttcgtatctcaagatggttctctggacaagaatgatatttcggattatgtgggatca
aatattcaagatcctatgagccgtgttgcaggggtgggtgagatccagctatttggcgcg
caatatgcaatgcgtatttggctagatccgctgaaattaactcaatataacctcaccagc
caagatattctagcatcgattcgtgagcaaaatgctcaagtttctgccggtcaattgggt
ggcgcgccagcaattaaggggcaggtattaaatgcgaccgtttctgcacagagtcgtctg
caaacggccgaagagtttaagaagatcatcattaagtctgatacttctggcgctaaggtt
tttcttgaagatgttgctcgtgttgaactcggtgccgaaagttatgcggtagaatcttat
tataacggtaagcctgcggctggtttggcgattaagctcgccactggtgctaatgcattg
gctaccgcagagcttgtgcgcgaaaaaattgatgagatgaagcccttcttccctcaaggg
ttagatgtggtttatccctatgatacgacgccatttgtcgataagtcgattgagggtgtt
gttcacacgttaatagaagctgtggtgttggtatttgttatcatgtacctattcttgcag
aacttccgcgcaaccctaattccaaccattgctgtccccgttgtgttacttggtaccttc
gcagttttgtctgcggccggtttctctatcaatacactcacaatgttcgcgatggtgcta
gctattggcttgctggtggatgatgccattgtggtggtcgaaaacgttgagcgtgtgatg
caagaagaggggttaagcccgttagaagccacacgtaaatcgatggatcagatcactgga
gcacttgttggtatcggtctgacactgtcggcggtatttgtgcctatggcgtttatgtcg
ggttctaccggcgttatctatcgtcagttctcagtgactatcgtatcggcgatggcgctc
tccgtgatggtagcgattattctgacgccggccctgtgtgccaccatgttgaaacctatt
gctaaagggcaccatggaatcgaaaccggtttctttggttggtttaaccgtagcttcgat
aagatgacttcgcgttatgaggcgagtgtcgcggcgatgatcaagcgcgctggacgcgtc
atgttgatctatctggccctgaccgttgctgtgggctggatcttcatgcgcatgccgaca
gctttcttgcctgatgaagaccaaggtattttgtttactcaggcgattttgccaacaaac
tcaacccaagaaagcacgaagaaagtgatggagaaagtcacagacttttatctcgatcaa
gagggagacaatgttaagtcggtcttcagcgtttcaggctttagtttcgctggtagcggt
caaaacatgggtcttgcgtttgtcggattaaaggattggtctgaacgaaaaaatccaggt
caagatatacagtctatttccagacgcgccatgggggccttctctcagatgaaagaagcc
tttgtatttgcgtttgtaccgccagcggtaatcgagctggggacagccaatggttttgat
ttttatctgcaagatagaaatggtcaaggtcacgaaaagctactcgaagcacgtaatatg
ctgttaggtatggctgcacagaatcctaatttagttggtgttcgccctaatggccaagaa
gatgcgcccatgtaccaaatccatgttgatcatgccaagcttagagcattgggggtcgat
attgattcggtaaacagtgtcctcggaactgcttggggtggtagttatgtgaatgacttc
attgatcgtggtcgtgttaagaaagtatacgttcaaggtgatgcacaatatcgtatgcaa
cctgaagatcttgactcgtggtacgtgagaaatgctcaaggtgagatggttccgttttcg
gcattcgcaaccggtagctgggagtttggctctccacgcctagagcgttttaatggtctt
cctgctatgaatatccaaggcggaacagcacctggttacagtactggtactgctatggca
gatatcgaagctatggtggataagttaccacctggatttggtgttgaatggaatggccta
tcatatgaagagcgtttatcgggcaaccaagcgccagcgttatatgcattgtctattatg
gtcgtgttcttggtacttgctgcgctctatgagagttggtcggttccatttgcggtcgtg
ttagtggttcctttgggaattattggtgcacttctggcgatgaatggccgtggtttaccc
aacgatgtattcttccaagtgggtctattaacgactgtgggtctagcgactaagaacgct
attttgattgttgaatttgccaaagacttctacgatcaaggtgctggtttagttgaagca
accttacatgcggttcgtgtgcgtttgcgccccattttgatgacctcacttgcttttggt
ctcggggttgttccgctagcgattagttctggtgtaggttctggcagtcagaatgctatc
ggtacaggcgtattgggcggcatgatgagctcgacattcctagggatcttctttattccg
atcttctttgttatcgttgaacgaatttttagtaaacgagagcgtaatggcggtagcgat
gcagccaaagtggactcaccaataaaagactaa
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