Shewanella psychrotolerans: K0I62_01980
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Entry
K0I62_01980 CDS
T09306
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
spsj
Shewanella psychrotolerans
Pathway
spsj00540
Lipopolysaccharide biosynthesis
spsj01100
Metabolic pathways
Module
spsj_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
K0I62_01980 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
spsj01005
]
K0I62_01980 (lpxC)
Enzymes [BR:
spsj01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
K0I62_01980 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
spsj01005
]
Lipid A
K0I62_01980 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
QYK01782
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All DBs
Position
430514..431434
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AA seq
306 aa
AA seq
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MIFQRTVKEMVKTTGVGLHSGNKVTLTIKPAPVNTGIVLVRTDLTPSVAIAAKADQVRET
TMCTALVNDDGVRISTIEHLFAALAGLGIDNAVIDVDAPEIPIMDGSASPWVFLLQSVGI
QEQAAAKKYLRIKRPVRVEDGDKWAELRPFKGFRVDFAIDFNHPEIARSQQHMVMDFSSS
AFVRDISRARTFGFMRDIEYLRANNLALGGSMENAVVLDEYRVLNPDGLRYEDEFVKHKI
LDAFGDLYVAGHAIVGEFCAYKTGHALNNQLVRALLAEQDAWELVSFEKEEEAPVSFAVP
TSATFA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgatttttcaaagaactgttaaagaaatggttaagaccactggtgtcggattgcattcc
ggtaacaaggtgactttgacgatcaaacccgcgccagttaatactgggatcgtattggtt
cgtactgacttaacccctagcgttgcgattgcagccaaagcggatcaagttcgtgaaaca
accatgtgtacggcgctggtaaatgacgatggtgttcgtatttctacgattgaacatctg
tttgctgcgttagcggggttagggatcgacaatgcagttatcgacgtcgatgcgcccgaa
attccgatcatggatggcagtgctagcccatgggttttcctattgcaatcagttggcatt
caagagcaagcggcagctaaaaaatatctaagaatcaagcgccctgtgcgtgttgaagat
ggcgacaagtgggcagagttacgtccatttaaagggttcagagtcgattttgctatcgat
tttaatcatcctgaaatcgccagaagtcagcagcatatggtgatggatttttcatcgtct
gcattcgttcgtgatatcagccgtgcgagaacctttgggtttatgcgcgacatcgaatat
ttgcgagccaataacctggcgttaggtggcagcatggaaaatgccgttgtgcttgatgaa
tatcgcgtcctcaaccccgatggtctgcgttatgaggatgagtttgttaagcacaaaata
ctcgatgcattcggtgacctttatgtcgctggtcatgccattgttggcgaattctgtgcc
tataaaacggggcatgcacttaataatcaattggtgcgcgccttgttagccgagcaagat
gcttgggagttagtgagtttcgagaaagaagaagaggctccagtgagcttcgcggtgccg
accagcgccactttcgcctaa
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