Shewanella psychrotolerans: K0I62_03740
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Entry
K0I62_03740 CDS
T09306
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
spsj
Shewanella psychrotolerans
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spsj03009
]
K0I62_03740 (rlmC)
Enzymes [BR:
spsj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
K0I62_03740 (rlmC)
Ribosome biogenesis [BR:
spsj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
K0I62_03740 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_15
Methyltransf_25
Cons_hypoth95
Methyltransf_12
TRM5-TYW2_MTfase
Methyltransf_11
UPF0020
Motif
Other DBs
NCBI-ProteinID:
QYK02099
LinkDB
All DBs
Position
846596..847732
Genome browser
AA seq
378 aa
AA seq
DB search
MKCAYFDAKQCLSCRNIEMPLSAQLAAKSAVLGELFADISVEQWLPPISGPESGFRNKAK
MVVLGAAHQPILGLVSPSGQPVSLCDCSLYPPEMQQLLHRLERFVRQAGIPPYRVDKQKG
ELKYILLTRSQVRGEYMLRFVLRSTTAIERIERELSTLLSEYPQIKVVSVNLQPVHMAIL
EGDEEIFLSEATRLEERFNDVPLFIRPKSFFQTHPEIAEKLYQTAREWTAQLQPSAIWDL
FCGVGGFGLHCASKQIALTGIEIEPEAIACAKMSAAAMGLKNVQFTALDSTEFARGGDAQ
DKPDLIIVNPPRRGIGEALCHSLSQFAPKAILYSSCNPYSLAKDLQQINGYRITKVQLFD
MFPHTDHFEVLVMLQREI
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
gtgaagtgtgcttatttcgatgccaagcagtgcctatcttgtcgcaatattgagatgccg
ttgtcggcgcagttagcggcaaagtcagcagtactaggtgagctttttgccgacatctcc
gttgagcaatggttgccaccaatatcaggtccagagagcggatttcgcaataaggcgaaa
atggtggtgcttggcgccgcgcatcaacctattttaggtttagttagcccaagtggtcag
cctgttagcttgtgcgactgttcgctttatcccccagagatgcagcagttgttgcatcga
ctcgaacgcttcgtacgccaagctgggatcccgccttatcgcgttgataaacaaaaaggc
gaacttaagtatatcttgctgacgcgcagtcaagtgcgtggtgagtatatgctgaggttt
gtactgcgttcgacaaccgcgattgagcgcatcgagcgggaactatcgacattactctct
gaatatccgcagataaaagtggtgtcagttaatctgcaacccgttcacatggctattttg
gaaggtgacgaggagatctttctgagtgaagcaacacggttagaggagcgcttcaatgat
gtgcctctctttattcgccctaaaagttttttccagactcatccagagattgccgaaaaa
ctgtatcaaaccgctcgtgaatggactgcgcaattacaacctagtgcgatttgggatctg
ttttgtggtgtgggtggttttggcttgcattgcgcatcaaagcagatagcactaacgggt
attgaaattgagcctgaagccatcgcttgtgccaagatgtcagcagcggcaatggggctt
aaaaatgtgcaatttactgcacttgattctaccgaatttgctcgtggtggcgatgcccaa
gataaacccgatctgattattgttaatcctccaagaaggggaattggcgaagcgctttgt
cattcacttagtcaatttgcccctaaggctatcttatattcaagttgtaatccgtactcc
ttggctaaagatctacaacagatcaatggttaccgaatcactaaggtacaactttttgat
atgtttcctcatacggaccatttcgaagtactagtcatgttacaacgtgagatctaa
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