Shewanella psychrotolerans: K0I62_07005
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Entry
K0I62_07005 CDS
T09306
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
spsj
Shewanella psychrotolerans
Pathway
spsj01501
beta-Lactam resistance
spsj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0I62_07005
01503 Cationic antimicrobial peptide (CAMP) resistance
K0I62_07005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsj02000
]
K0I62_07005
01504 Antimicrobial resistance genes [BR:
spsj01504
]
K0I62_07005
Transporters [BR:
spsj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K0I62_07005
Antimicrobial resistance genes [BR:
spsj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K0I62_07005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QYK03246
LinkDB
All DBs
Position
complement(1584131..1587361)
Genome browser
AA seq
1076 aa
AA seq
DB search
MHNGDKQTTKLGFSGRIAALFQLSAITPLLALLGLLLGLFAVLVTPKEEEPQIDVTFADV
FIPFPGATPSEVEQLVTLPMEQVLSQIKGVDTLYSFSQPDGALLIAIFEVGIPRNEAIVK
LYNQVYSNMDKVATQAGVGEPQIKPRGIDDVPIVSLTLWSKSTETSAEQLTHIAKGLETE
LKRIPGTREIYSVGRHDVSLNVRIDPAKMSFYGLTYDDISNSLASNNHVSMPVSLIQDNQ
EIKIQTGQFLQSQQEVEQLVVAVYQDESGKSAPVYLADIASVSLNTDIPTKNAWHSDKQG
TFPAVTVAIGKQPGENAVDVANAILDRLDKVDNILIPNDVEVTVSRNYGKTAGDKANTLI
LKLVFATSAVVILVFLAMGLREAIVVGIAIIITLAITLFASWAWGFTLNRISLFALIFSI
GILVDDAIVVVENIHRHMALGKRSFTELIPVAVDEVGGPTILATFTVIAALMPMAFVSGL
MGPYMSPIPINASMGMLISLAIAFIVTPWLATKLLKKHQPTNGAPETDEPSTTRMVKIFT
TLISPFVHGKQARKARLGLAAAIALLIAIAIALPISQLVVLKMLPFDNKSEFQVMVDMPE
GTPVEQTQKVLKALGQQLNQVEEVDNYQMYAGTNAPMNFNGLVRHYFLRETQELGDIQVN
LVDKSERHRDSHAIAVSVRESLQQIATQYNANVKVVEVPPGPPVWSPILAEVYAPNEALR
EQAALQLQQLFHQTQDVVDIDIYLPAAQQKWQVNIDRSKASLLGVPYSNIVDLVATSIGG
KEVSYLHKANQTTPVPIKLQLDEGAKVDLEQVLNLRLNTISGNSVPVSELVNINKTQIDA
PIIHKNMIPMIMVVADMAGPLDSPLYGMFEMAASIDDKNGLGFEQHYVNQPSGLDSIAVL
WDGEWKITYETFRDMGIAYGVGMIAIYLLVVGQFKSYTVPLIIMAPIPLTIIGVMPGHAL
LGAQFTATSMIGMIALAGIIVRNSILLVDFINQETAAGIPFEQAVIHSGAVRAKPIMLTG
LAAMIGALFILDDPIFNGLAISLIFGIFVSTLLTLVVIPVLYYAVMHKKLSHNAAN
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgcataatggcgataaacaaacgacaaaactgggtttttctggccgtatagccgccctt
ttccagttgagtgcaataacgcccttactagcactccttgggttattacttggcctgttt
gccgtattggtcaccccaaaagaggaagagccacaaatcgatgtcacctttgctgatgtc
tttatccccttccctggcgcaacgcctagcgaagttgaacaactagttaccctgccgatg
gagcaagtgctgtcgcaaataaaaggcgtagacaccctctactcattctctcaacccgat
ggcgcactgctaatcgccatttttgaagtgggtattccccgcaacgaagcgatcgtcaaa
ctgtataatcaggtctattccaatatggataaggtcgcgacccaggctggcgtcggcgaa
ccacaaatcaaaccccgtggtattgatgatgtgcccattgtcagcctaaccttatggtca
aaatcgaccgagacctcggcagaacaattgactcatatcgccaaaggattggaaaccgaa
ctcaaacgcattcctggcacacgtgagatctatagtgttggacgccatgacgttagtctg
aatgtccgtatcgatccggcaaaaatgagcttttatggcctaacctatgatgacattagc
aacagccttgcgagcaacaatcacgtctctatgcctgtttcgctaattcaagataaccaa
gagataaaaatacaaaccggccaatttttacaatctcaacaagaggttgagcaactcgtt
gtcgccgtataccaagatgaatcgggcaagagtgcgccagtctatctcgctgatatcgca
agcgttagcctcaatacagatattccaaccaaaaatgcttggcacagcgacaaacaggga
acttttcctgcggtcaccgtcgccattggcaaacaacctggcgaaaatgcggtcgacgtc
gccaatgcgatattagatcgtctcgataaagtcgataacatcttaatacctaacgatgtt
gaggtcaccgtatcgcgaaattatggtaagacagcaggcgataaagccaataccctgatt
ttaaagctagtatttgccacctctgccgttgtcatcttagtgttcttagcgatgggccta
cgtgaagctatcgtagttggtatcgccattattattaccttagcgatcaccctatttgct
tcatgggcttggggctttacgcttaatcggatctcactatttgccctcatcttctccatc
gggatattggtcgatgatgccattgtcgtggtcgaaaatattcaccgtcatatggctctg
ggaaaacgttcatttaccgaattaattcccgtcgctgtcgatgaagtgggcggcccgaca
atattggctactttcaccgtgatagcggcattgatgcctatggcatttgtgtcgggtctt
atggggccttatatgagtcctattccgattaatgccagtatgggaatgctgatctcactt
gctatcgcttttattgtcacgccttggttagcgactaaactgctcaaaaaacatcaaccc
accaacggtgctccagagacagatgaaccgtctacaacacgaatggtgaagatatttact
acgctcatctcgccctttgttcacggtaaacaagcacgtaaagctagattaggtctggca
gcagccatagcgctactgatcgctatcgctatcgccttgcctattagtcagttggtggtt
ttaaaaatgctgccttttgataacaaatcagagttccaagtgatggtcgatatgcctgaa
ggcactcctgttgaacagacacaaaaagtgcttaaagcgctggggcaacagcttaatcaa
gttgaagaagtcgataactatcagatgtacgccggcaccaatgcgccaatgaatttcaac
ggtctagttagacactattttttacgagaaacccaagaactaggcgacatccaagttaac
ttggtcgataagtctgagcgtcatcgcgatagccacgctattgcggtctctgtaagagag
tcactgcaacagattgcgacccaatacaatgccaatgttaaggttgtcgaagtgcctcca
ggaccaccagtatggtcgcccattttggcagaggtctatgcgccaaatgaagcgcttaga
gagcaagcggcattacaactgcagcaactgttccatcaaactcaagatgttgttgatatc
gatatctatttacccgctgcgcagcaaaagtggcaagtgaatattgaccgctcaaaagcc
agcctattgggtgtgccgtacagcaacattgttgatttagtcgcaacatcgattggcggt
aaagaggtcagctatctgcacaaagcaaaccaaacgaccccagtacctataaaattacag
cttgatgagggcgccaaagtcgatctggagcaagtacttaatctcagattgaacaccata
agtggcaactcagttcctgtatctgaactggttaatatcaataagactcaaattgatgca
ccaatcattcacaaaaacatgatcccgatgatcatggtcgttgcagatatggcgggacca
ctagatagcccactctatggcatgtttgagatggcagcgtcgattgatgataaaaacggc
ttaggtttcgagcagcactatgttaatcaaccttcagggctcgatagcattgcagtactt
tgggacggtgaatggaagatcacctatgagacctttagggatatgggtattgcctatgga
gttggcatgatagcaatttatttgcttgttgtcggtcaatttaaatcttacacggtgccg
ctgattattatggcgcctattccattaaccattattggtgtgatgccaggccatgctctc
cttggggctcagttcacggcaacgtcgatgattgggatgatagcccttgcaggcataatt
gtgcgtaactcaattctattggtcgactttatcaatcaagaaacagctgcgggcatccca
tttgaacaagcggttatccactctggagccgtccgagccaaacccattatgttaactgga
ctcgcggcgatgattggcgccctattcattctcgatgaccccatatttaatggattagcc
atcagtttgatcttcggtattttcgtatcaaccttgctgacattagtcgtcatcccagtg
ttgtattacgccgtcatgcataaaaaattgtcacataatgctgctaactaa
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