KEGG   Shewanella psychrotolerans: K0I62_10895
Entry
K0I62_10895       CDS       T09306                                 
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
spsj  Shewanella psychrotolerans
Pathway
spsj01501  beta-Lactam resistance
spsj01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:spsj00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    K0I62_10895
   01503 Cationic antimicrobial peptide (CAMP) resistance
    K0I62_10895
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:spsj03036]
    K0I62_10895
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:spsj02000]
    K0I62_10895
   01504 Antimicrobial resistance genes [BR:spsj01504]
    K0I62_10895
Chromosome and associated proteins [BR:spsj03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    K0I62_10895
Transporters [BR:spsj02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   K0I62_10895
Antimicrobial resistance genes [BR:spsj01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    K0I62_10895
SSDB
Motif
Pfam: HlyD_D23 HlyD_3 Biotin_lipoyl_2 HlyD_2 DUF7801 DUF1951
Other DBs
NCBI-ProteinID: QYJ99957
LinkDB
Position
complement(2471556..2472641)
AA seq 361 aa
MKKIITISILLAAGAATYYYLNQPQSSGSARARPTPNVVVAKAEMQPIRDEVEALGTGKA
NESITVTPKVTDVVTELNFDDGDIVEKGRLLVRLQDREQIASVTVANVKMNDHKRELDRI
SSLVTSQTVAALERDRLQTLIDTAKAELEQAESALKDRRIRAPFSGRLGLRQISQGSLVT
PGTVITTLDDISTIKLDFSVPERFLQALQIGKSVEATAVAFDGEMFRGKVVSIDSRVNPV
TRAVVVRAEIPNKDLRLLPGMLMKVKLIKQSREALIIPEAAIIPIQKDHFVYLVNDENVV
ERRQVKLGLRKRGWVEIVEGVAVGEQVMIRGILKVRPGDTVKVQMSEHFSFQEQAKVEPV
V
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgaaaaaaattataacaatctcaatactattagcggcaggtgccgccacttattactac
ctaaatcagccccaatcgtcaggctctgctcgagcaagaccaacgcctaatgtcgttgtt
gcaaaggctgagatgcaacccattcgtgatgaggttgaagcattaggtaccggaaaagcc
aatgagtcgattaccgtaactcccaaagtgaccgatgtggtaacagaactcaactttgat
gatggggatattgttgaaaaaggccgactgttagtgcgtttgcaagatagagagcagatt
gctagcgtgacagtggcaaatgttaaaatgaatgaccataagagagagcttgatcgtatt
agctctttggtgaccagtcaaactgtcgcagcgcttgagcgtgatagattacaaacccta
atcgatacggctaaagctgagcttgaacaagctgagtccgcattgaaagatcgccgtatc
cgtgctccgttctcgggacgtctaggtctacgtcaaatcagtcagggtagcttagttact
cctggtacagtgatcacgactcttgatgatatatctaccattaaacttgacttttctgtt
ccagaacgctttttacaagctttgcaaataggtaaatcagttgaggccaccgctgttgct
ttcgatggtgaaatgttcagaggcaaagtggtctctatcgatagccgtgttaaccctgtt
acccgcgccgtcgtggttcgcgcggaaatcccgaataaagatttacgtttgctgcctggt
atgttgatgaaagttaaacttatcaagcagagccgagaggcattaattattcctgaagct
gcaatcattccaatccagaaagatcattttgtttatcttgttaatgatgaaaatgtcgtt
gagcgtcgtcaagttaagcttggtttacgtaaacgtggctgggttgaaattgttgagggg
gttgcagttggtgaacaggtgatgatccgcggtattttgaaggtgcgtccaggcgatacg
gtcaaggtacaaatgagtgaacattttagctttcaagaacaagctaaggtggagccagta
gtatga

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