Shewanella psychromarinicola: EGC80_04610
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Entry
EGC80_04610 CDS
T09848
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18298
membrane fusion protein, multidrug efflux system
Organism
spsr
Shewanella psychromarinicola
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsr02000
]
EGC80_04610
01504 Antimicrobial resistance genes [BR:
spsr01504
]
EGC80_04610
Transporters [BR:
spsr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EGC80_04610
Antimicrobial resistance genes [BR:
spsr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
EGC80_04610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
tRNA-synt_2
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
AZG34278
UniProt:
A0A3N4ETD1
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All DBs
Position
1088201..1089433
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AA seq
410 aa
AA seq
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MKTLTSIKTTLLVSLTALLLVACGEQPAQQANTSAAPKVDVANVLYERITEWDQFTGRLQ
APEKVTLVPRVSGYIESINFKEGALVQKGDVLFTIDSSVFIAEYERLKAELTSALSANQL
AKNDYARANKLFYQKAVSEELIDTRRSTMHQTAAAVASVNAALTRAQLNVEYTHVTAPIT
GRVSYANETAGNFVTAGQTHLTSLVSTSHMYAYFDIDEQSYLKYAALSFENKRQNPRLGN
NAVVMALANETSFNHQGVIDFVDNAVNQQTGTIRVRANFANQDNQLLPGLFARISIAGSE
SYQRILIDDKAIMTDLSNKFVLVVSDKNILEYRGVSLGAKLHGLRIITAGLSPNDTIVVN
SLQKVRPNVTIEPNLTEMAGDGQLEALHQAQQILDNQPLTAQVADDASQG
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgttaacatcaattaaaaccactttattagtcagcctaacggcattgctatta
gtggcgtgcggcgaacaacctgcacaacaagccaatacatctgcagcgcctaaggtagat
gttgctaacgtgctttatgagcgcattaccgagtgggatcaatttaccggacgcttacaa
gcccctgaaaaggtcactttagtgcctcgcgtatcgggctatattgaatcgattaacttt
aaagaaggcgcgctagtgcaaaaaggcgatgtgttatttaccatcgactcgagtgttttt
attgctgaatatgaacgccttaaagcagaattaaccagtgctctatcggccaatcaactc
gctaaaaatgactacgcacgggcaaataaacttttttatcaaaaagcggtatcagaagag
ctaattgatactcgtcgctctactatgcatcaaactgcggcagcggttgcgtcagttaac
gccgcattaacccgcgcacaacttaacgttgaatacacccatgttaccgctcctatcacg
ggtcgtgtttcatatgccaacgaaaccgcaggtaacttcgttacggcaggacaaacacat
ctcaccagtttagtatcaacatcgcatatgtacgcttatttcgatatcgacgagcaaagc
tatttaaaatatgcggccttatcgttcgagaataaacgccagaatcctcgtttaggtaac
aatgccgtggttatggcgcttgccaatgaaaccagttttaatcaccaaggcgtgatcgac
tttgttgataatgcagtaaaccaacaaaccggtactattcgtgttagagccaactttgct
aatcaagacaatcagttacttccaggcttatttgctcgcatcagcattgctggtagcgag
tcgtatcaacgtattttaattgacgacaaagccattatgactgacctaagcaacaagttt
gtcttagtggtaagcgacaaaaatatccttgaatatcgtggtgttagcctcggagcgaaa
cttcatggtttgcgtattattaccgcagggttatcgcctaacgacaccatcgtggttaac
agcctgcaaaaagtacgtcctaacgtcactattgagccaaacctgaccgaaatggcaggt
gacggtcagcttgaagccttgcatcaagcgcaacaaatcctcgataaccagcctctcaca
gcacaagttgctgatgacgctagtcaaggttaa
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