Shewanella psychromarinicola: EGC80_04615
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Entry
EGC80_04615 CDS
T09848
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18299
multidrug efflux pump
Organism
spsr
Shewanella psychromarinicola
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsr02000
]
EGC80_04615
01504 Antimicrobial resistance genes [BR:
spsr01504
]
EGC80_04615
Transporters [BR:
spsr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
EGC80_04615
Antimicrobial resistance genes [BR:
spsr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
EGC80_04615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AZG34279
UniProt:
A0A3N4E2H3
LinkDB
All DBs
Position
1089446..1092607
Genome browser
AA seq
1053 aa
AA seq
DB search
MLSQFFIKRPIFAAVLSLLFFISGALAVWQLPITEYPEVVPPTVVVTANYPGANPKVIAE
TVASPLEQEINGVENMLYMSSQATSDGRMTLTITFAIGTDVDLAQTQVQSRVERAKPRLP
EEVQRLGIVTEKSSPSLTMVVHLTSPDNRYDMLYLSNYAVLKVKDELARITGVGAVRVFG
AGDYSMRVWLDPNKVAAISLSPSNIVAAIREQNQQAAAGSLGAQPSGDSDFQLLINVKGR
LSSVEEFENIIIKVGDEGQITRLKDVARVELGASTYALRSMLDNKDAAALPVFQASGSNA
IQISDDVRSKMAELSQAFPEGLTYDIVYDPTVFVRGSIKAVVQTLLEALLLVVLVVVLFL
QTWRASIIPLVAVPVSLVGTFAFMHLLGFSLNALSLFGLVLAIGIVVDDAIVVVENVERN
ISDGLSPVAATQKAMKEVTGPIVATTLVLAAVFIPTAFMSGLTGQFYKQFALTITISTFI
SAINSLTLSPALSALLLKGHHEKKDVLTRGMDKLLGGWLFNPFNRLFARMSEGYGWLVKK
IIRFGAVVGIIYIGLVGLTGLQFANTPTGYVPGQDKQYLIAFAQLPDAASLDRTEAVVKE
MSRIALAQPGVAHAVAFPGLSINGFTNSTNSAILFTPLDDFADRKDPSLSAGAIAAALNQ
QFAAIDGAYIAIFPPPPVQGLGTIGGFRLQIQDRANYGYEELYKVTMEVMQKAWATPELA
GVFSSYQVSVPQLDVNIDRTKAKQQSVSLDELFSTLQGYMGSVYANDFNQFGRTYQVKVQ
ADEQFRQTPEQIAQLKVRNNQGEMVPIGSFINVTNTSGPDRVMHYNGFTTAELNGGAAPG
YSSGEAQAAIEKILAETLPNGMTYEWTEITYQQILAGNAGTYIYPLIILLVFMVLAAQYE
SLTLPLAIILIIPMTLLSALTGVLIYGGDNNIFTQIGLIVLVGLATKNAILIVEFAKELQ
DKGMQPLEAILEAGRLRLRPILMTSIAFIMGVVPMVFSSGPGSEMRQAMGVAVFSGMIGV
TIFGLILTPLFYYALAKRGKHNAELAEPVESHD
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctcaattttttattaaaagaccgatttttgccgctgttctgtcgctactgttc
tttatttcaggcgcgctggcggtatggcaattaccgatcaccgaataccctgaggtagta
ccgccaacagtcgttgttacggcaaactacccaggcgccaacccaaaagtaatcgccgaa
acggttgcctcaccacttgagcaagagataaacggcgtagaaaacatgttgtacatgtct
tcacaagccacatccgatggccgcatgacgctaaccatcacctttgcgattggtactgac
gttgatttagctcaaacccaagtgcaaagccgtgtagagcgtgcaaaacctcgcttacca
gaagaagtacaacgcttaggtattgtgaccgaaaagtcatcaccgagtttaaccatggtg
gtgcatttaacctcgcccgataaccgttatgacatgttatatctgtctaactatgcggta
ttgaaagtgaaagacgaattagcccgaattaccggtgtaggggcggtgcgcgtatttggc
gcaggtgactacagtatgcgtgtatggctagatcctaataaagtggcagcaatcagttta
tctccgagtaatattgttgccgctattcgtgagcaaaaccaacaagcagcagcaggaagc
ctaggcgcacaacctagtggcgacagtgatttccaattattgatcaacgttaaaggtcgt
ttatccagcgttgaagagttcgagaatattattattaaagtgggcgatgaaggtcagatc
acccgtttaaaggatgttgctcgggttgaattaggcgcatcaacttatgccctacgttca
atgttagacaataaagacgctgctgcactacctgttttccaagcatcgggttcaaacgcg
attcaaatatctgatgatgtccgttctaaaatggctgaattgtctcaggcatttccagaa
ggattaacctacgacatcgtctacgatccaaccgtgttcgtccgcggttcaataaaagcg
gtagtgcaaacactgctcgaagctttattgctggtagtactcgtcgtggtactgttttta
caaacgtggcgcgcatccattattccattagtggccgttccggtatcgcttgtgggtacc
tttgcctttatgcacctattgggcttctcactgaatgccttatcattatttggtttggta
ttagccatcggtattgtcgttgacgatgctatcgtggtggttgaaaacgttgaacgaaat
atctctgacggtttatctcctgttgctgccacccaaaaggcaatgaaagaagtgaccggc
ccgattgtcgccaccacactggttctagcagcagtatttattccaaccgcctttatgtca
ggtttaaccggccagttttataagcagttcgcgctgacgatcaccatttccacctttatt
tcagcgattaactcgttaaccctgagccctgcattatcggcattactgcttaaaggtcat
cacgagaaaaaagatgtgcttactcgtggcatggataaactgctgggaggctggctattc
aatccatttaatcgcctgtttgcgcgcatgtctgaaggttacggttggctggttaaaaag
atcatccgttttggtgcggttgtcggcattatttatatcggtttagtcggcttaacaggc
ttacaatttgccaacacccctactggttatgtaccagggcaagataaacaatatcttatc
gcctttgcacaattgcctgatgccgcgtcattagatcgcactgaagctgtcgtgaaagaa
atgtcacgaattgccttagcgcaacctggtgtcgcccatgcggtagcctttccaggctta
agcattaatggctttactaacagcaccaatagcgccattttgtttaccccgttggatgac
tttgccgatcgcaaagatccatcattatcagcaggcgcaattgcagcagcgttaaatcaa
cagtttgccgccattgacggtgcgtatattgcgattttcccaccaccgccagtacaaggc
ttaggcaccattggtggctttagattacaaattcaagaccgggcaaactacggttatgaa
gagttgtataaagtgaccatggaagtgatgcaaaaagcatgggcaacgccagagttagcg
ggggtgttctcgagttatcaagtgagtgtgccacaacttgacgtgaacattgatcgtact
aaagccaaacaacaatcggtgtcgttagacgaattgttttccacattacagggttacatg
ggctcggtttacgccaacgacttcaaccaatttggccgcacttatcaagttaaggtgcaa
gccgatgagcagtttagacaaacgccagaacaaatagcccaacttaaagtacgcaacaac
caaggcgaaatggtgcctattggttcatttattaatgtgaccaatacatccgggcctgac
cgagtcatgcattacaacggttttaccactgcagaacttaacggtggtgctgcgccagga
tacagttctggtgaggcacaagctgcgattgaaaaaatattggcagaaaccttacccaat
ggcatgacttacgagtggacagagatcacttaccagcagattttggccggtaatgcgggt
acctatatttatccgttaattatcttattagtgtttatggtattagcggcgcaatatgaa
agtttaaccttgccattagccattattcttattattccaatgacactattgtcagcatta
acaggggtgcttatctacggtggcgataacaatatctttacccagattggtttgattgta
ctggtggggctggcaaccaaaaacgccattctgattgttgagtttgccaaggagttacaa
gacaaaggcatgcaaccattagaggcgatacttgaagcgggtcgtttacgtttacggcct
attttaatgacctcgattgccttcattatgggggtggtacctatggtattctcgagcgga
ccaggttcagaaatgcgccaagcaatgggtgttgcagtattctctggcatgattggggtg
actatttttggccttatcctcacgccactgttttactatgctctggctaagcgtggcaaa
cataacgccgagttagctgaaccagtcgagtcgcacgactaa
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