Shewanella psychromarinicola: EGC80_06780
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Entry
EGC80_06780 CDS
T09848
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr01501
beta-Lactam resistance
spsr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EGC80_06780
01503 Cationic antimicrobial peptide (CAMP) resistance
EGC80_06780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spsr03036
]
EGC80_06780
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsr02000
]
EGC80_06780
01504 Antimicrobial resistance genes [BR:
spsr01504
]
EGC80_06780
Chromosome and associated proteins [BR:
spsr03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
EGC80_06780
Transporters [BR:
spsr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EGC80_06780
Antimicrobial resistance genes [BR:
spsr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EGC80_06780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Biotin_lipoyl_2
HlyD_D23
HlyD_3
PI3K_P85_iSH2
DUF6599
DUF1344
Biotin_lipoyl
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
AZG34655
UniProt:
A0A3N4E9E4
LinkDB
All DBs
Position
complement(1571889..1573079)
Genome browser
AA seq
396 aa
AA seq
DB search
MLLARTFKFPLSILLCLTVLGCNEQAGSDNKPIEIIHVDTITLAPSILRLSKDLPGRVTA
FKEAEVRPQITGIVKSRLYKEGSYVEAGDVLFQIDPTNYQSAVNSAEAQLAKAIASQTST
QKAAIRYAELLKKSLTSQEHYDEADSAYQQAKAEVAVRQAALDDANLQLSYTKIKAPISG
KAGFSQVSDGSLLTANQSDYITTIIQTDNVYIDMQQSALAFYKIQQEFQNSIIKKPNIPV
SITLEDGTTYNQTGQLEFTDTQTDGSTGSVALRAIMPNPENSLLAGMYVRAHISMPEARK
YLVVSQSTVVRSQSGKPSVFVVDDNNKVAKKSIILGSEVGNAWVVKEGLTVGNKIVINNL
NKIKDGLTVILDNATETDIESDTSIINPGTNSKNLD
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgttgttagcaagaacatttaaattccctttgtctattttactctgtttaaccgtatta
ggctgtaatgagcaggcgggatctgacaacaaacccattgagattattcatgtagacacc
ataacgttagccccctcaatattacgattaagtaaggatttacccggacgagtgaccgcc
tttaaagaggcagaggttcgtccccaaataacgggtattgttaaaagtcgtttgtataaa
gaaggcagttatgttgaagctggcgatgtgctatttcaaattgatccgacaaactatcaa
tctgcagtaaacagtgcagaagcacaattagcaaaagcaattgcgagtcaaacctctact
caaaaagcggctattcgttacgctgaattactgaaaaagagtctcacaagtcaagaacac
tatgatgaagccgattctgcttatcaacaagccaaagccgaagtcgcggttcgtcaggca
gcattagatgatgctaaccttcaactatcttatactaagattaaagcacctatctcaggt
aaagcgggattctctcaagtatctgacggttctttactaacagcaaatcaatcagattac
atcaccaccattattcaaactgataatgtatatattgatatgcagcagtcagcccttgct
ttttataagatacaacaagagtttcaaaactctattataaaaaaacccaatattcctgtc
tcaataacattagaagatggcacaacatataaccaaacaggtcaactagagtttaccgat
actcaaactgatggatcaacaggctcggtggctttacgtgcgattatgccaaatccagag
aattcgttactagctggtatgtatgttagagctcatatttcaatgccagaagctcgtaaa
tatcttgttgtctcacaatcaactgtcgtaagaagtcaatcagggaaaccttcagtattt
gttgttgacgacaataataaagtcgctaaaaaatccataattttaggcagtgaagtcggc
aatgcttgggtagttaaagaagggttaacggtaggtaataaaatagtcataaataattta
aataaaattaaagatggcctaactgtcattttagataatgcgactgaaactgatattgaa
agcgatacttcaataataaaccctggcactaactcaaagaatctggattaa
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