Shewanella psychromarinicola: EGC80_12300
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Entry
EGC80_12300 CDS
T09848
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr01501
beta-Lactam resistance
spsr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EGC80_12300
01503 Cationic antimicrobial peptide (CAMP) resistance
EGC80_12300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spsr03036
]
EGC80_12300
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsr02000
]
EGC80_12300
01504 Antimicrobial resistance genes [BR:
spsr01504
]
EGC80_12300
Chromosome and associated proteins [BR:
spsr03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
EGC80_12300
Transporters [BR:
spsr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EGC80_12300
Antimicrobial resistance genes [BR:
spsr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EGC80_12300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
NQRA_N
Jag_N
Motif
Other DBs
NCBI-ProteinID:
AZG35601
UniProt:
A0A3N4DP04
LinkDB
All DBs
Position
complement(2794823..2795872)
Genome browser
AA seq
349 aa
AA seq
DB search
MSRLSNYLFLGAILTTIVLPSAAQASDVDTLKLVYSEQYQPRLYDAKIEAIKAATVSAQT
SGRIMNIHFDVNDLVPQGAALLEITNKEQGAGLAGAEAELAKAEALNTEAQAQYIRYKAL
FPKGAISKGAMDEATAKAKSSKQAISAAQAQLVKAKEGLNYTVVSAPFSGRMTQRFVEQG
ETISYGQALFSGYDNQHLRAVFQIPQQDIAQVQQQDQVTIQLLNGDEITSNDIQVYQFAD
PLTHQHQVRVNLDVSNMQDVIVGQWTKVIVNFPSRTSLMIPLSAIHQVSDLTSVYRKNAG
EIVLNQVRIGRIDRQHNTAEVLSGLLEGDEIVIDAGRYLIMSSAAKGQE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcttatccaattatttattccttggtgccatactcaccacaatagttttaccc
agcgcagcccaagcctctgatgttgatacattaaagctggtgtattccgaacaatatcaa
ccgcgattatacgatgcgaaaattgaagccattaaagctgcaactgtgtctgcgcaaacc
tcgggacggatcatgaatatccattttgatgttaatgacctggttccacaaggcgcggct
ttattggaaattaccaataaagaacaaggggctggattagcaggggctgaagctgaactc
gccaaagcagaagcgttaaacactgaagctcaagcacagtatattcgttataaagcatta
ttccccaaaggggcgatatcaaaaggtgccatggatgaagccactgccaaagccaaatcc
agcaaacaagctatcagcgccgctcaagcacaattagtaaaagctaaagaaggtttgaat
tacaccgtagtgagcgcacctttcagtggtcgaatgacccaacgcttcgttgaacaaggt
gaaacgatatcctacggccaagccttattctccggttatgataatcaacatcttagagcg
gtatttcaaattccccaacaagatattgctcaggtgcaacaacaagatcaagttactatt
caattattaaacggcgatgaaatcacttcgaatgatatccaagtgtatcaatttgccgat
cctttgacacaccaacatcaagtgagagtcaatcttgatgtcagtaatatgcaagatgtc
attgtgggtcaatggaccaaagtaatagtaaactttccaagcagaacgagtttgatgatc
ccattgtcggccatacaccaagtcagtgacttaacctctgtgtatcgcaaaaatgcgggg
gaaatagtgcttaaccaagtacgtataggccgaatagatcgtcaacataatactgctgaa
gtattatcagggctactggaaggcgatgaaattgttatcgatgctggacgatatttaatt
atgtcctcagcagcgaaaggtcaggagtaa
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