Shewanella psychromarinicola: EGC80_14220
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Entry
EGC80_14220 CDS
T09848
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr01501
beta-Lactam resistance
spsr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EGC80_14220
01503 Cationic antimicrobial peptide (CAMP) resistance
EGC80_14220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spsr03036
]
EGC80_14220
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsr02000
]
EGC80_14220
01504 Antimicrobial resistance genes [BR:
spsr01504
]
EGC80_14220
Chromosome and associated proteins [BR:
spsr03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
EGC80_14220
Transporters [BR:
spsr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EGC80_14220
Antimicrobial resistance genes [BR:
spsr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EGC80_14220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
NQRA_N
Peptidase_M23
EAD11
D-ser_dehydrat
Motif
Other DBs
NCBI-ProteinID:
AZG35920
UniProt:
A0A3N4DPK5
LinkDB
All DBs
Position
complement(3235714..3236787)
Genome browser
AA seq
357 aa
AA seq
DB search
MDRFISMKKMAIPLLCIAVLSGCSGEAEQAKEDEKFAIPVETALVTTGNVSSFYSTTATL
EAPEESHVMSRIAGIIEKINVEEGDRVTKGQILAVIDAKRQRYDFNRSEAEVQIIQQELN
RLNKMNNKEFISQDQMAKLEFNLQAAKAQRDLAELQVKESQITSPINGVIAERYVKTGNM
AKEFQELFYVVNQDQLHGILHLPEQQLASLRVGQQASIIQQHQGTKSDIIDAKVLRISPI
VDAQSGTFKVTLAVPNQDAKLKAGMFTRVELKYDTHLDVLTVPYNALINQDNTQALYVIK
DTKAQRREVSLGFRENNTVEILFGVEAGEQIVIRGQQNLKDQSLVEIITPLSFAAIR
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggataggttcatcagcatgaagaaaatggcaattcctttactttgtattgcagtattg
agtggttgcagcggcgaagcagaacaagcaaaagaagatgaaaaatttgcgattccggtt
gaaaccgctttagtcaccacaggcaatgtatcctctttctacagcacgaccgctacactt
gaagcacctgaagagtcccatgtgatgagccgcattgctgggatcatcgaaaagattaac
gttgaagaaggcgatcgggttaccaaaggacaaatacttgcggtcattgatgccaagcgt
caacgttatgatttcaatcgctctgaagccgaagtgcaaattattcagcaagaattaaat
cgtttaaacaaaatgaacaacaaagagtttattagccaagatcaaatggccaagctcgag
ttcaatctacaagcggcgaaagcacagcgcgacttagccgagctgcaagtcaaagaaagc
caaatcacctcgcccattaatggcgttattgccgagcgttatgttaaaacgggcaatatg
gcgaaagagttccaagagctattttatgttgtcaatcaagaccaacttcacggcatattg
cacttaccagaacaacaacttgccagtttacgagtgggtcaacaagccagtattattcaa
caacatcagggtactaaatccgatattatcgacgcaaaagtactgcgtattagtcccatt
gtagatgctcaaagcggcacctttaaagtgacattagccgtgccaaatcaagatgcaaaa
ttaaaagcaggtatgtttactcgtgttgaactgaaatacgacactcacctagatgtgctt
acagtgccttataacgcattaatcaaccaagacaatactcaagcgttatatgtgataaaa
gacactaaagcacagcgacgcgaagtcagtttgggctttcgtgaaaataacactgttgaa
attttatttggtgttgaagctggcgaacaaatagtcatccgcggccagcaaaatcttaaa
gatcaatcgttggtagagattattaccccacttagcttcgctgctattcgataa
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